RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-240	ENST00000484412	TPSB2	P20231	275 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	ADRA1D	P25100	572 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	SPAM1	P38567	509 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	DUSP3	P51452	185 aa	Predicted RBP	13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	NOVA1	P51513	510 aa	Known RBP	13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	ACVR1	Q04771	509 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	ITGA9	Q13797	1035 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	TPSAB1	Q15661	275 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	GPR33	Q49SQ1	333 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	ZNF542P	Q5EBM4	170 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	TTC27	Q6P3X3	843 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	LRRC8B	Q6P9F7	803 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	NLRP9	Q7RTR0	991 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	GKN2	Q86XP6	184 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	MCU	Q8NE86	351 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	OR6C4	Q8NGE1	309 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	ZNF398	Q8TD17	642 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	BLOC1S5	Q8TDH9	187 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	OR1E3	Q8WZA6	343 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	GLYATL1	Q969I3	302 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	CDKN2AIPNL	Q96HQ2	116 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	CAMK1G	Q96NX5	476 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	LRRC61	Q9BV99	259 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	FGF22	Q9HCT0	170 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	NLE1	Q9NVX2	485 aa	Predicted RBP	13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	CD84	Q9UIB8	345 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	TMPRSS11E	Q9UL52	423 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	GPR34	Q9UPC5	381 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	WASF3	Q9UPY6	502 aa		13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	APOBEC2	Q9Y235	224 aa	Known RBP	13.85	□□□□□ -0.19
HDLBP-240	ENST00000484412	SPTBN4	Q9H254	2564 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	TRBV5-4	A0A0C4DH59	114 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	MAGEB16	A2A368	324 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	ZNF185	O15231	689 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	FANCG	O15287	622 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	SIGLEC6	O43699	453 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	SLC25A14	O95258	325 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	MLN	P12872	115 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	PNLIP	P16233	465 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	SHC2	P98077	582 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	E2F1	Q01094	437 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	SKIDA1	Q1XH10	827 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	PRRT3	Q5FWE3	981 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	C6orf132	Q5T0Z8	1188 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	KDM7A	Q6ZMT4	941 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	NYAP1	Q6ZVC0	841 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	GSTA5	Q7RTV2	222 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	HID1	Q8IV36	788 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	EID2	Q8N6I1	236 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	GPR156	Q8NFN8	814 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	HEXDC	Q8WVB3	486 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	GLMN	Q92990	594 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	SPATA16	Q9BXB7	569 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	CYP4F12	Q9HCS2	524 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	EVA1B	Q9NVM1	165 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	CFAP54	Q96N23	3096 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	LRP4	O75096	1905 aa		13.84	□□□□□ -0.19
HDLBP-240	ENST00000484412	TDRD6	O60522	2096 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	GLYATL1P3	A0A0U1RQE8	302 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	HEATR9	A2RTY3	570 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	PRR19	A6NJB7	356 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	SMAP	O00193	183 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	KRT14	P02533	472 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	ANXA6	P08133	673 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	ZSCAN5DP	P0CG00	497 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	PML	P29590	882 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	PAFAH1B1	P43034	410 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	ZNF140	P52738	457 aa	Predicted RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	SARNP	P82979	210 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	TMEM115	Q12893	351 aa	Predicted RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	SPARCL1	Q14515	664 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	ATP13A5	Q4VNC0	1218 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	PCID2	Q5JVF3	399 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	LDLRAP1	Q5SW96	308 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	PSAPL1	Q6NUJ1	521 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	ADGRG6	Q86SQ4	1221 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	SLCO6A1	Q86UG4	719 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	NRROS	Q86YC3	692 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	RBFA	Q8N0V3	343 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	DDHD1	Q8NEL9	900 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	OR4K2	Q8NGD2	314 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	OR52K1	Q8NGK4	314 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	LMX1A	Q8TE12	382 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	PTCD2	Q8WV60	388 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	ZNF514	Q96K75	400 aa	Predicted RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	CNDP2	Q96KP4	475 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	APOLD1	Q96LR9	279 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	AP1M1	Q9BXS5	423 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	FTSJ1	Q9UET6	329 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	SUFU	Q9UMX1	484 aa		13.83	□□□□□ -0.2
HDLBP-240	ENST00000484412	LY6G6E	A0A0G2JKS1	128 aa		13.82	□□□□□ -0.2
HDLBP-240	ENST00000484412		E7EVH7	732 aa		13.82	□□□□□ -0.2
HDLBP-240	ENST00000484412	GIPC1	O14908	333 aa		13.82	□□□□□ -0.2
HDLBP-240	ENST00000484412	USP12	O75317	370 aa		13.82	□□□□□ -0.2
HDLBP-240	ENST00000484412	SRP72	O76094	671 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-240	ENST00000484412	GAS8	O95995	478 aa		13.82	□□□□□ -0.2
HDLBP-240	ENST00000484412	APRT	P07741	180 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms