RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 ATXN7L3BQ96GX2 97 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 VAT1Q99536 393 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 APOL2Q9BQE5 337 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 CDH19Q9H159 772 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 GBA3Q9H227 469 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 MAGEE1Q9HCI5 957 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 TRNAU1APQ9NX07 287 aaKnown RBP12.19□□□□□ -0.46
MSH5-216ENST00000484309 ZNHIT2Q9UHR6 403 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 RNF215Q9Y6U7 377 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 DMXL2Q8TDJ6 3036 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 LOC285095A0A1B0GVY8 99 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 A0A1W2PQM1 296 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 TCRBV7S2A1N4TA0A589 114 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 PMS2P1A4D2B8 440 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 MIF4GDA9UHW6 222 aaKnown RBP12.18□□□□□ -0.46
MSH5-216ENST00000484309 BRINP1O60477 761 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 TJP3O95049 919 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 AGTP01019 485 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 FGF1P05230 155 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 BPIP17213 487 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
MSH5-216ENST00000484309 PDX1P52945 283 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 MPP3Q13368 585 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
MSH5-216ENST00000484309 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 PYCR3Q53H96 274 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 C3orf38Q5JPI3 329 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ZNF569Q5MCW4 686 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ANKRD20A2Q5SQ80 823 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 CERCAMQ5T4B2 595 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ANKRD20A1Q5TYW2 823 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ANKRD20A3Q5VUR7 823 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ITPRIPL1Q6GPH6 555 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 FOXR1Q6PIV2 292 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 OGFOD3Q6PK18 319 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 C19orf48Q6RUI8 117 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 CHST15Q7LFX5 561 aaPredicted RBP12.18□□□□□ -0.46
MSH5-216ENST00000484309 CACTIN-AS1Q8N1I8 211 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 BLOC1S5Q8TDH9 187 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 FSD1LQ9BXM9 530 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 NRSN2Q9GZP1 204 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 RALYQ9UKM9 306 aaKnown RBP12.18□□□□□ -0.46
MSH5-216ENST00000484309 TRHDEQ9UKU6 1024 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ATXN7L1Q9ULK2 861 aaPredicted RBP12.18□□□□□ -0.46
MSH5-216ENST00000484309 R3HDM2Q9Y2K5 976 aaKnown RBP12.18□□□□□ -0.46
MSH5-216ENST00000484309 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 ZZEF1O43149 2961 aa12.18□□□□□ -0.46
MSH5-216ENST00000484309 FREM2Q5SZK8 3169 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 TRBV23OR9-2A0A075B6M9 112 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 RGSL1A5PLK6 1076 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 GOLGA6L9A6NEM1 432 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
MSH5-216ENST00000484309 DNAJC6O75061 913 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 MTX2O75431 263 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 ECEL1O95672 775 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 ACP5P13686 325 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 GEMP55040 296 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 GABREP78334 506 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 RTP5Q14D33 572 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 SLC1A5Q15758 541 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 PLA2G4EQ3MJ16 856 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 CRTC3Q6UUV7 619 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 GLT6D1Q7Z4J2 308 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 B3GNT8Q7Z7M8 397 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 CCNJLQ8IV13 435 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 RAVER1Q8IY67 606 aaKnown RBP12.17□□□□□ -0.46
MSH5-216ENST00000484309 NAGSQ8N159 534 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 TTC30BQ8N4P2 665 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 TAB3Q8N5C8 712 aaPredicted RBP12.17□□□□□ -0.46
MSH5-216ENST00000484309 TRAM1L1Q8N609 369 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 SCARF2Q96GP6 870 aaPredicted RBP12.17□□□□□ -0.46
MSH5-216ENST00000484309 HES6Q96HZ4 224 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 GFM1Q96RP9 751 aaKnown RBP12.17□□□□□ -0.46
MSH5-216ENST00000484309 FERMT1Q9BQL6 677 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 ZSCAN5AQ9BUG6 496 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 OR2AG1Q9H205 316 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 LRRN3Q9H3W5 708 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 LZTFL1Q9NQ48 299 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 LRIT1Q9P2V4 623 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 ATXN10Q9UBB4 475 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 SATB2Q9UPW6 733 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 KCNK6Q9Y257 313 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
MSH5-216ENST00000484309 PIKFYVEQ9Y2I7 2098 aa12.17□□□□□ -0.46
MSH5-216ENST00000484309 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 D6RAR5 112 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 NTN3O00634 580 aaPredicted RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 GPR39O43194 453 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 KRT86O43790 486 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 TCEA3O75764 348 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 ANXA9O76027 345 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms