RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LVRNQ6Q4G3 990 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 GDPD4Q6W3E5 623 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 USP53Q70EK8 1073 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 RAB11FIP2Q7L804 512 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 BNIPLQ7Z465 357 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TSPYL5Q86VY4 417 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 GKN2Q86XP6 184 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 FBXO39Q8N4B4 442 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 AFAP1L2Q8N4X5 818 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 ARL10Q8N8L6 244 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 MLKLQ8NB16 471 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 OR6C4Q8NGE1 309 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 CASKIN2Q8WXE0 1202 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 CENPTQ96BT3 561 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TBC1D31Q96DN5 1066 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 LIN37Q96GY3 246 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 PRR11Q96HE9 360 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 GDAP1L1Q96MZ0 367 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 GFM1Q96RP9 751 aaKnown RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 NCAPGQ9BPX3 1015 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 SLC12A9Q9BXP2 914 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TCEAL2Q9H3H9 227 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 NDST4Q9H3R1 872 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 EPB41L5Q9HCM4 733 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TMEM248Q9NWD8 314 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 SEPT10Q9P0V9 454 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 DNAI1Q9UI46 699 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 TMEM59LQ9UK28 342 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 AJAP1Q9UKB5 411 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 PCDHGA7Q9Y5G6 932 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 HEMK1Q9Y5R4 338 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 ACTL7AQ9Y615 435 aa5.92□□□□□ -1.46
CSDE1-207ENST00000483407 ARID1BQ8NFD5 2236 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-207ENST00000483407 PTPN13Q12923 2485 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 FAM170AA1A519 330 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 D6RAR5 112 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 AQP7O14520 342 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 KDELR3O43731 214 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TMCC1O94876 653 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF205O95201 554 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 RPLP0P05388 317 aaKnown RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CD3EP07766 207 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 MMEP08473 750 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 PLEKP08567 350 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 JMJD7P0C870 316 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 LIPCP11150 499 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 SFTPCP11686 197 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 UCHL3P15374 230 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ADRA1BP35368 520 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 HK3P52790 923 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 PDX1P52945 283 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 RHOAP61586 193 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 NOMO3P69849 1222 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 NFKB2Q00653 900 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 GRM3Q14832 879 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 NFATC4Q14934 902 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 IRF4Q15306 451 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CAMK4Q16566 473 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CPSF6Q16630 551 aaKnown RBP eCLIP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 VWA3BQ502W6 1294 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 INO80DQ53TQ3 878 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 C2CD6Q53TS8 623 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CT47A1Q5JQC4 288 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 LRRC73Q5JTD7 316 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CFAP58Q5T655 872 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ATXN7L2Q5T6C5 722 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 MANEALQ5VSG8 457 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 KLHDC7AQ5VTJ3 777 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TRNP1Q6NT89 227 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ERAP2Q6P179 960 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ENPP7Q6UWV6 458 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 LEKR1Q6ZMV7 388 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 STRADAQ7RTN6 431 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 NLRP14Q86W24 1093 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF677Q86XU0 584 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 IRF2BP1Q8IU81 584 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 EMC1Q8N766 993 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 KYQ8NBH2 561 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TP53I13Q8NBR0 393 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 PCDH19Q8TAB3 1148 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 RXFP2Q8WXD0 754 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CPA5Q8WXQ8 436 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TMEM159Q96B96 161 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 SGF29Q96ES7 293 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 MAGEB10Q96LZ2 347 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 ZFYVE21Q9BQ24 234 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TUBGCP2Q9BSJ2 902 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 WRAP53Q9BUR4 548 aaKnown RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CPEB1Q9BZB8 566 aaKnown RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 EDEM3Q9BZQ6 932 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TTYH3Q9C0H2 523 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 CLPBQ9H078 707 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 MBNL1Q9NR56 388 aaKnown RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 DONSONQ9NYP3 566 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 DKK3Q9UBP4 350 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 KLQ9UEF7 1012 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 GPR34Q9UPC5 381 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 MFHAS1Q9Y4C4 1052 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TRAF6Q9Y4K3 522 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms