RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 STAT5AP42229 794 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 CD97P48960 835 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 COPB1P53618 953 aaKnown RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 FOXM1Q08050 763 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 LRP8Q14114 963 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 DPYSQ14117 519 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 ERV3-1Q14264 604 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 CRTC2Q53ET0 693 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 CT47A1Q5JQC4 288 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 MARC1Q5VT66 337 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 CDKAL1Q5VV42 579 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 LRRC66Q68CR7 880 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 PLEKHA7Q6IQ23 1121 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 TCTN3Q6NUS6 607 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 ASB18Q6ZVZ8 466 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 CYP4V2Q6ZWL3 525 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 USP45Q70EL2 814 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 CHST15Q7LFX5 561 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 NLRP8Q86W28 1048 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 BBS5Q8N3I7 341 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 ESX1Q8N693 406 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 NEK11Q8NG66 645 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 EXD1Q8NHP7 514 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 SH3KBP1Q96B97 665 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 COX14Q96I36 57 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 MCCC1Q96RQ3 725 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 MGME1Q9BQP7 344 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 RIOK2Q9BVS4 552 aaKnown RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 TBC1D10AQ9BXI6 508 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 TRIM7Q9C029 511 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 ZWILCHQ9H900 591 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 PRDM8Q9NQV8 689 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 PARVAQ9NVD7 372 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 ETNK2Q9NVF9 386 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 KCNK6Q9Y257 313 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 PPIL1Q9Y3C6 166 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 KCTD3Q9Y597 815 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 PCYT1BQ9Y5K3 369 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-206ENST00000483030 LRP4O75096 1905 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 BSNQ9UPA5 3926 aa7.32□□□□□ -1.24
CSDE1-206ENST00000483030 TTLL8A6PVC2 850 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 H3BRJ5 948 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 MAFKO60675 156 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 DNAJC6O75061 913 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 AGFG2O95081 481 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 PYGLP06737 847 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 FURINP09958 794 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ACP5P13686 325 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF28P17035 718 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 DLSTP36957 453 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 MMP13P45452 471 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 UQCRFS1P47985 274 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF135P52742 658 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 STC1P52823 247 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 UBXN1Q04323 297 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ITKQ08881 620 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 MAP7Q14244 749 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 RALGPS1Q5JS13 557 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 TMCO3Q6UWJ1 677 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 C6orf15Q6UXA7 325 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF765Q7L2R6 523 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 IRF2BP2Q7Z5L9 587 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 TMEM135Q86UB9 458 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 SLC9B2Q86UD5 537 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 PLXDC1Q8IUK5 500 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 PSTKQ8IV42 348 aaKnown RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 CCDC13Q8IYE1 715 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 NDUFAF2Q8N183 169 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ATPAF2Q8N5M1 289 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 GALNT6Q8NCL4 622 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 NSMCE1Q8WV22 266 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 RNF166Q96A37 237 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ELMO2Q96JJ3 720 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 TEX15Q9BXT5 2789 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ULBP3Q9BZM4 244 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 NUP62CLQ9H1M0 184 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 STN1Q9H668 368 aaKnown RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 NT5MQ9NPB1 228 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 FANCLQ9NW38 375 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 SIDT1Q9NXL6 827 aaKnown RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 CPNE7Q9UBL6 633 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 CNOT8Q9UFF9 292 aaKnown RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 TLK1Q9UKI8 766 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 CNOT6Q9ULM6 557 aaKnown RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 POLHQ9Y253 713 aa7.31□□□□□ -1.24
CSDE1-206ENST00000483030 OAS3Q9Y6K5 1087 aaKnown RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 ARHGEF17Q96PE2 2063 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-206ENST00000483030 KIR2DS5A0A0G2JLQ3 304 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 A0A0G2JNG1 304 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 A0A0J9YYE9 177 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 PIPSLA2A3N6 862 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 CDC14CA4D256 554 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 A6NCN8 305 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 LGALS16A8MUM7 142 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 KIR2DS3K7RE56 304 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 FZD6O60353 706 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 VPS4BO75351 444 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms