RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 QTRT1Q9BXR0 403 aaKnown RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 SPRY4Q9C004 299 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 SPATC1LQ9H0A9 340 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 KCNK15Q9H427 330 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 KLHL31Q9H511 634 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 PPP1R3EQ9H7J1 279 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 DNAJC18Q9H819 358 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 CNOT10Q9H9A5 744 aaKnown RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 EPB41L5Q9HCM4 733 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 PAPOLBQ9NRJ5 636 aaKnown RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 ACSS1Q9NUB1 689 aaPredicted RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 PSD3Q9NYI0 1048 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 MSRB1Q9NZV6 116 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 LARSQ9P2J5 1176 aaKnown RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 ZNHIT2Q9UHR6 403 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 RASAL2Q9UJF2 1139 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 AGO2Q9UKV8 859 aaKnown RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 ISY1Q9ULR0 285 aaKnown RBP3.64□□□□□ -1.83
CLCC1-209ENST00000482889 B3GALT5Q9Y2C3 310 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 KCNK7Q9Y2U2 307 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 POMT1Q9Y6A1 747 aa3.64□□□□□ -1.83
CLCC1-209ENST00000482889 LOC100509620A0A075B734 347 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CPED1A4D0V7 1026 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 TMEM8BA6NDV4 472 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 B4DGG1 531 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 AKR1B15C9JRZ8 316 aaPredicted RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 DNM1LO00429 736 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 ADAM10O14672 748 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 SMAD9O15198 467 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 LDB2O43679 373 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 TRUB2O95900 331 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 NUDT3O95989 172 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 IGLV2-14P01704 120 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CYP19A1P11511 503 aaPredicted RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FDPSP14324 419 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FBLP22087 321 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 ACHEP22303 614 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CALRP27797 417 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CDH12P55289 794 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 GAD2Q05329 585 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 SREBF2Q12772 1141 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 TRAF1Q13077 416 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 PPIGQ13427 754 aaKnown RBP eCLIP3.63□□□□□ -1.835e-7■■■□□ 14.6
CLCC1-209ENST00000482889 TUBB2AQ13885 445 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 SLMAPQ14BN4 828 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 TNIP1Q15025 636 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 EFNB3Q15768 340 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 PKN2Q16513 984 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 PNLIPRP3Q17RR3 467 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 ZNF284Q2VY69 593 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 SLC9C1Q4G0N8 1177 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FAM98BQ52LJ0 330 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 KLHL26Q53HC5 615 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 C6orf10Q5SRN2 563 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 STRIP1Q5VSL9 837 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CST9LP1Q5W188 147 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 HEPHL1Q6MZM0 1159 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 UBE2Q1Q7Z7E8 422 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 ARID3BQ8IVW6 561 aaPredicted RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CCAR2Q8N163 923 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FBXO39Q8N4B4 442 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 OR10S1Q8NGN2 331 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 HASPINQ8TF76 798 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 INPP5DQ92835 1189 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 NXNL1Q96CM4 212 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CFAP57Q96MR6 1250 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 SIGLEC11Q96RL6 698 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 DDOQ99489 341 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CITED2Q99967 270 aaPredicted RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 TUBB2BQ9BVA1 445 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 NUP85Q9BW27 656 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 C1QTNF1Q9BXJ1 281 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FAM234AQ9H0X4 552 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 CLK4Q9HAZ1 481 aaKnown RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 RNF146Q9NTX7 359 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 PRMT7Q9NVM4 692 aaPredicted RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.63□□□□□ -1.83
CLCC1-209ENST00000482889 OR14J1Q9UGF5 321 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 FBXW11Q9UKB1 542 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 RCOR1Q9UKL0 485 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 ERVK-11Q9UQG0 969 aa3.63□□□□□ -1.83
CLCC1-209ENST00000482889 TAF1P21675 1872 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 A0A0U1RQK1 487 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 EDDM13A0A1B0GTR0 161 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 SMIM35A0A1B0GVV1 85 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 ZNF320A2RRD8 509 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 MANSC4A6NHS7 340 aaPredicted RBP3.62□□□□□ -1.83
CLCC1-209ENST00000482889 M0QZ24 198 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 RNF8O76064 485 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 ACTN1P12814 892 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 ENO3P13929 434 aaPredicted RBP3.62□□□□□ -1.83
CLCC1-209ENST00000482889 CHRNB2P17787 502 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 MAOAP21397 527 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 ATP5F1P24539 256 aaPredicted RBP3.62□□□□□ -1.83
CLCC1-209ENST00000482889 ATP5DP30049 168 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 GABRA5P31644 462 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 APOBEC1P41238 236 aaKnown RBP3.62□□□□□ -1.83
CLCC1-209ENST00000482889 PRCPP42785 496 aa3.62□□□□□ -1.83
CLCC1-209ENST00000482889 CRKLP46109 303 aaKnown RBP3.62□□□□□ -1.83
CLCC1-209ENST00000482889 ME1P48163 572 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms