RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CABS1Q96KC9 395 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 TRIM5Q9C035 493 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 POFUT1Q9H488 388 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 NOD2Q9HC29 1040 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 PDE7BQ9NP56 450 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 UBA2Q9UBT2 640 aaPredicted RBP6.7□□□□□ -1.34
CLK1-212ENST00000482590 DNAI1Q9UI46 699 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 FBXL5Q9UKA1 691 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 GMEB2Q9UKD1 530 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 NDRG2Q9UN36 371 aaKnown RBP6.7□□□□□ -1.34
CLK1-212ENST00000482590 PCDHB6Q9Y5E3 794 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 PCDHA3Q9Y5H8 950 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 PCDHA13Q9Y5I0 950 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 NUP205Q92621 2012 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 NCOR2Q9Y618 2525 aa6.7□□□□□ -1.34
CLK1-212ENST00000482590 GPR179Q6PRD1 2367 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 CACNA1BQ00975 2339 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 A8MXE2 369 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 FAM25EA8MYX2 175 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 H0YCG3 227 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 FCHO1O14526 889 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 PSMA7O14818 248 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 CLDN3O15551 220 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 SYNCRIPO60506 623 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 MFAP3LO75121 409 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 SEC22BO75396 215 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 PIAS2O75928 621 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 JUNP05412 331 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 PSMC3P17980 439 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 FBLP22087 321 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 FCARP24071 287 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 U2AF2P26368 475 aaKnown RBP eCLIP6.69□□□□□ -1.348e-9■■■□□ 17.9
CLK1-212ENST00000482590 MAPK3P27361 379 aaPredicted RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 GDI1P31150 447 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 LIG4P49917 911 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 TSSK4Q6SA08 328 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 ALKAL1Q6UXT8 129 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 PIWIL3Q7Z3Z3 882 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 USP37Q86T82 979 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 YAF2Q8IY57 180 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 MAML2Q8IZL2 1156 aaPredicted RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 DAW1Q8N136 415 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 SUMF1Q8NBK3 374 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 IPMKQ8NFU5 416 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 RASSF8Q8NHQ8 419 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 SCAMP5Q8TAC9 235 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 CSGALNACT1Q8TDX6 532 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 SMARCD2Q92925 531 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 C18orf25Q96B23 403 aaPredicted RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 TCEAL4Q96EI5 215 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 C16orf45Q96MC5 204 aaPredicted RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 TMEM237Q96Q45 408 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 DMRTA2Q96SC8 542 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 ADI1Q9BV57 179 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 TRMT61BQ9BVS5 477 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 TRIM54Q9BYV2 358 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 MAGEB5Q9BZ81 275 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 DPH1Q9BZG8 443 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 PLA2G2FQ9BZM2 168 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 HAPLN2Q9GZV7 340 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 SARS2Q9NP81 518 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 PRMT8Q9NR22 394 aaPredicted RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 POLR3BQ9NW08 1133 aaPredicted RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 ZSCAN32Q9NX65 697 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 LARSQ9P2J5 1176 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 TUBGCP4Q9UGJ1 667 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 RAB23Q9ULC3 237 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 USP18Q9UMW8 372 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 UBQLN1Q9UMX0 589 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 MTO1Q9Y2Z2 717 aaKnown RBP6.69□□□□□ -1.34
CLK1-212ENST00000482590 CCL27Q9Y4X3 112 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 YIPF1Q9Y548 306 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 LYVE1Q9Y5Y7 322 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 HS3ST4Q9Y661 456 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 CEP192Q8TEP8 1941 aa6.69□□□□□ -1.34
CLK1-212ENST00000482590 UBA6A0AVT1 1052 aaPredicted RBP6.68□□□□□ -1.34
CLK1-212ENST00000482590 MED19A0JLT2 244 aaPredicted RBP6.68□□□□□ -1.34
CLK1-212ENST00000482590 VWA3AA6NCI4 1184 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 H3BQV1 296 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 ZNF263O14978 683 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 TXNL1O43396 289 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 TBC1D4O60343 1298 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 SEC24AO95486 1093 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 OR4Q2P0C623 313 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 TMIGD3P0DMS9 266 aaPredicted RBP6.68□□□□□ -1.34
CLK1-212ENST00000482590 NPPBP16860 134 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 GJA1P17302 382 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 TFEBP19484 476 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 CDC25AP30304 524 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 LRPAP1P30533 357 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 PSMB10P40306 273 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 EIF2DP41214 584 aaKnown RBP6.68□□□□□ -1.34
CLK1-212ENST00000482590 TRPC1P48995 793 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 CCR3P51677 355 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 MGAT2Q10469 447 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 MPP3Q13368 585 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 GPR68Q15743 365 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 KYAT1Q16773 422 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 C2orf76Q3KRA6 126 aa6.68□□□□□ -1.34
CLK1-212ENST00000482590 FAM78AQ5JUQ0 283 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms