RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ACP5P13686 325 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 NFKB1P19838 968 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 MPSTP25325 297 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 CCKBRP32239 447 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 ETV5P41161 510 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 ZNF75DP51815 510 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 B4GALNT1Q00973 533 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 SPA17Q15506 151 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 ZNF569Q5MCW4 686 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 HENMT1Q5T8I9 393 aaKnown RBP10.39□□□□□ -0.75
CPSF4-212ENST00000482251 BROXQ5VW32 411 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 CRTC3Q6UUV7 619 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 USP53Q70EK8 1073 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 CHST15Q7LFX5 561 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-212ENST00000482251 VSIG1Q86XK7 387 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 RCBTB1Q8NDN9 531 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 GPR26Q8NDV2 337 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 SLC37A2Q8TED4 501 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 TFB1MQ8WVM0 346 aaKnown RBP10.39□□□□□ -0.75
CPSF4-212ENST00000482251 GRAMD1AQ96CP6 724 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 EID2BQ96D98 161 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 TMEM74Q96NL1 305 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 SPATA16Q9BXB7 569 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 SLC25A51Q9H1U9 297 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 FAM83DQ9H4H8 585 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 ZFYVE1Q9HBF4 777 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 GLOD4Q9HC38 313 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 KLHL8Q9P2G9 620 aaPredicted RBP10.39□□□□□ -0.75
CPSF4-212ENST00000482251 CNOT6Q9ULM6 557 aaKnown RBP10.39□□□□□ -0.75
CPSF4-212ENST00000482251 SPO11Q9Y5K1 396 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
CPSF4-212ENST00000482251 UNC13CQ8NB66 2214 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 hCG_1818297A0A087WSY0 165 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 PRAMEF33A0A0G2JMD5 474 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 EIF4E1BA6NMX2 242 aaKnown RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 AURKAO14965 403 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 PPM1DO15297 605 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 SNX2O60749 519 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 PRAMEF10O60809 474 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 DNAJC6O75061 913 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 MTX2O75431 263 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 PYGLP06737 847 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 PNLIPP16233 465 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 SLC5A2P31639 672 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CSF2RBP32927 897 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CD68P34810 354 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CHRNA4P43681 627 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 MAPK10P53779 464 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 TMPRSS3P57727 454 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CDK18Q07002 472 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 WASHC5Q12768 1159 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CLN3Q13286 438 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 TFDP2Q14188 446 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 C16orf72Q14CZ0 275 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 TCEAL1Q15170 157 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 TEX44Q53QW1 395 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 TFDP3Q5H9I0 405 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 C11orf63Q6NUN7 778 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 IGF2-ASQ6U949 168 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 GPR155Q7Z3F1 870 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CLEC14AQ86T13 490 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 DAAM2Q86T65 1068 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 SLITRK4Q8IW52 837 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 SLC25A41Q8N5S1 370 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 ACRBPQ8NEB7 543 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 P3H4Q92791 437 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 SCARF2Q96GP6 870 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 CCDC74BQ96LY2 380 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 UBL7Q96S82 380 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 HEMGNQ9BXL5 484 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 GPR63Q9BZJ6 419 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 OR2AG1Q9H205 316 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 OSGEPL1Q9H4B0 414 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 BPIFA1Q9NP55 256 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
CPSF4-212ENST00000482251 TMEM9Q9P0T7 183 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 IGSF10Q6WRI0 2623 aa10.38□□□□□ -0.75
CPSF4-212ENST00000482251 GPR39O43194 453 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 LCA5LO95447 670 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 CPNE6O95741 557 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 NDST3O95803 873 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 ZNF8P17098 575 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 MAPK9P45984 424 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 HADHBP55084 474 aaKnown RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 NAP1L1P55209 391 aaKnown RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 ZFP36L1Q07352 338 aaKnown RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 EIF3IQ13347 325 aaKnown RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 NFATC2Q13469 925 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 TGIF1Q15583 401 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 SEPT7Q16181 437 aaKnown RBP10.37□□□□□ -0.75
CPSF4-212ENST00000482251 TAZQ16635 292 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 CCDC181Q5TID7 509 aa10.37□□□□□ -0.75
CPSF4-212ENST00000482251 ZNF438Q7Z4V0 828 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms