RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GLDNQ6ZMI3 551 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 ATG14Q6ZNE5 492 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 TP53INP2Q8IXH6 220 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 FAM126BQ8IXS8 530 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SLC15A3Q8IY34 581 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ZNF366Q8N895 744 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SPACA9Q96E40 222 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 MAP7D2Q96T17 732 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SLC25A23Q9BV35 468 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 C1QTNF5Q9BXJ0 243 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 FZD8Q9H461 694 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SH2D4AQ9H788 454 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SMPD3Q9NY59 655 aaPredicted RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 KLHL14Q9P2G3 628 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 NDRG4Q9ULP0 352 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 WBP11Q9Y2W2 641 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 SZT2Q5T011 3432 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 IKBKBO14920 756 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 MCF2LO15068 1137 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 BCL10O95999 233 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ACHEP22303 614 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 MATR3P43243 847 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMC6-208ENST00000481708 MAGEA4P43358 317 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 CAMPP49913 170 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 GALCP54803 685 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 B4GALNT1Q00973 533 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 EIF2B5Q13144 721 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 EIF4HQ15056 248 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 FAM214AQ32MH5 1076 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 FAM47AQ5JRC9 791 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 LRIF1Q5T3J3 769 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 MFSD7Q6UXD7 560 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SLC46A3Q7Z3Q1 461 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SGMS1Q86VZ5 419 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 LILRA2Q8N149 483 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 WDR48Q8TAF3 677 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PTERQ96BW5 349 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 PEX11GQ96HA9 241 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 RBM14Q96PK6 669 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 PARK7Q99497 189 aaKnown RBP3.35□□□□□ -1.87
SMC6-208ENST00000481708 NLKQ9UBE8 527 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 ITM2BQ9Y287 266 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 SNX9Q9Y5X1 595 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 DMDP11532 3685 aa3.35□□□□□ -1.87
SMC6-208ENST00000481708 WDR19Q8NEZ3 1342 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 ELOVL7A1L3X0 281 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 CAPN14A8MX76 684 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 BIN1O00499 593 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 MITFO75030 526 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 AKR7A3O95154 331 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 EPN2O95208 641 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 IGHA1P01876 353 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 COX7A2P14406 83 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 ACADLP28330 430 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 MDH1P40925 334 aaKnown RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 CD151P48509 253 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 CDH13P55290 713 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 MZT1Q08AG7 82 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 KCNC3Q14003 757 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 CRYMQ14894 314 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 ADGRF1Q5T601 910 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 C1orf185Q5T7R7 199 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 TMEM182Q6ZP80 229 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 CFAP52Q8N1V2 620 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 CTCFLQ8NI51 663 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 SETD6Q8TBK2 473 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 KCNJ9Q92806 393 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 GTF3C6Q969F1 213 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 GSDMAQ96QA5 445 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 GPHA2Q96T91 129 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 ELOVL1Q9BW60 279 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 HRH4Q9H3N8 390 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 AATFQ9NY61 560 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMC6-208ENST00000481708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMC6-208ENST00000481708 CTTNBP2NLQ9P2B4 639 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 HSFX1Q9UBD0 423 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 A0A0G2JNJ9 132 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 LNP1A1A4G5 178 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 MBD3L5A6NJ08 208 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 SLC9B1P1A6NJY1 282 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 KIF2AO00139 706 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 GASTP01350 101 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 FGBP02675 491 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 ETS1P14921 441 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 IL7RP16871 459 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 HK1P19367 917 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 AZGP1P25311 298 aaKnown RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 PON1P27169 355 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 ARL4AP40617 200 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 TNNT2P45379 298 aaPredicted RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 EIF3BP55884 814 aaKnown RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 ZBTB16Q05516 673 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 IQCB1Q15051 598 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 P3H1Q32P28 736 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 DNTTIP2Q5QJE6 756 aaKnown RBP3.34□□□□□ -1.87
SMC6-208ENST00000481708 TXNDC8Q6A555 127 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 CENPPQ6IPU0 288 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 CCDC105Q8IYK2 499 aa3.34□□□□□ -1.87
SMC6-208ENST00000481708 KLHDC9Q8NEP7 349 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms