RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CCL4P13236 92 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 MPSTP25325 297 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 DYNLT1P63172 113 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 IFI35P80217 286 aaPredicted RBP18.42■□□□□ 0.54
CLK1-211ENST00000481641 CFHR1Q03591 330 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 LY6DQ14210 128 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 LYSMD3Q7Z3D4 306 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 RFX6Q8HWS3 928 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 EID2BQ96D98 161 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 CCDC74BQ96LY2 380 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 CMKLR1Q99788 373 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 MAK16Q9BXY0 300 aaKnown RBP18.42■□□□□ 0.54
CLK1-211ENST00000481641 TSPY26PQ9H489 355 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 FAM83DQ9H4H8 585 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 ARFGAP3Q9NP61 516 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 TMEM9Q9P0T7 183 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 DNPEPQ9ULA0 475 aa18.42■□□□□ 0.54
CLK1-211ENST00000481641 C9orf172C9J069 976 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 PYGLP06737 847 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 ARHGAP25P42331 645 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 LLGL1Q15334 1064 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 ZNF648Q5T619 568 aaPredicted RBP18.41■□□□□ 0.54
CLK1-211ENST00000481641 HENMT1Q5T8I9 393 aaKnown RBP18.41■□□□□ 0.54
CLK1-211ENST00000481641 CHST15Q7LFX5 561 aaPredicted RBP18.41■□□□□ 0.54
CLK1-211ENST00000481641 TMEM159Q96B96 161 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 AGAP3Q96P47 875 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 PKD2L2Q9NZM6 624 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 ACSL6Q9UKU0 697 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 SHOC2Q9UQ13 582 aa18.41■□□□□ 0.54
CLK1-211ENST00000481641 IGHV1OR21-1A0A087WYE8 117 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 MTA2O94776 668 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 SLC4A1P02730 911 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 TPM1P09493 284 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 CSF2RBP32927 897 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 NOP2P46087 812 aaKnown RBP18.4■□□□□ 0.54
CLK1-211ENST00000481641 GPR3P46089 330 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 PCSK7Q16549 785 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 SKOR2Q2VWA4 1001 aaPredicted RBP18.4■□□□□ 0.54
CLK1-211ENST00000481641 ALS2CLQ60I27 953 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 MFSD7Q6UXD7 560 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 VASH2Q86V25 355 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 RHOT2Q8IXI1 618 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 CCHCR1Q8TD31 782 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 SLC37A2Q8TED4 501 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 PMEPA1Q969W9 287 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 IMP4Q96G21 291 aaKnown RBP18.4■□□□□ 0.54
CLK1-211ENST00000481641 OLFM3Q96PB7 478 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 TRIB3Q96RU7 358 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 KCNK4Q9NYG8 393 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 SAE1Q9UBE0 346 aaPredicted RBP18.4■□□□□ 0.54
CLK1-211ENST00000481641 KCNK6Q9Y257 313 aa18.4■□□□□ 0.54
CLK1-211ENST00000481641 HELZ2Q9BYK8 2649 aaKnown RBP18.4■□□□□ 0.54
CLK1-211ENST00000481641 PIEZO2Q9H5I5 2752 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 ZNF487B1APH4 448 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 LIPCP11150 499 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 ACP5P13686 325 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 COMTP21964 271 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 LIMK2P53671 638 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 PEX6Q13608 980 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 PDK1Q15118 436 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 NT5DC3Q86UY8 548 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 GPR26Q8NDV2 337 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 SPATA22Q8NHS9 363 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 ADGRE3Q9BY15 652 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 VPS18Q9P253 973 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 TBC1D29Q9UFV1 150 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 ZNF462Q96JM2 2506 aa18.39■□□□□ 0.53
CLK1-211ENST00000481641 ZW10O43264 779 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 SNX2O60749 519 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 ZIC2O95409 532 aaPredicted RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 MT-CYBP00156 380 aaPredicted RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 FGF3P11487 239 aaPredicted RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 PPM1FP49593 454 aaPredicted RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 LRP8Q14114 963 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 LRRC38Q5VT99 294 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 VSIG1Q86XK7 387 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 RHOT1Q8IXI2 618 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 RAVER1Q8IY67 606 aaKnown RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 SFRP1Q8N474 314 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 JPH3Q8WXH2 748 aaPredicted RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 WBP1Q96G27 269 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 SPATA16Q9BXB7 569 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 SLC25A51Q9H1U9 297 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 GOLPH3Q9H4A6 298 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 ZFYVE1Q9HBF4 777 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 UBP1Q9NZI7 540 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 AKAP7Q9P0M2 348 aaPredicted RBP18.38■□□□□ 0.53
CLK1-211ENST00000481641 ATXN10Q9UBB4 475 aa18.38■□□□□ 0.53
CLK1-211ENST00000481641 SDK2Q58EX2 2172 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 AKR1B15C9JRZ8 316 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 PPP1R12AO14974 1030 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 ZFXP17010 805 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 ZNF8P17098 575 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 FASLGP48023 281 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 ARSDP51689 593 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 CDK18Q07002 472 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 TBX2Q13207 712 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 NFATC2Q13469 925 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 CLPPQ16740 277 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 ODF2Q5BJF6 829 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms