RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 PCDHGB1Q9Y5G3 927 aa3.74□□□□□ -1.81
COPA-204ENST00000481522 WDR87Q6ZQQ6 2873 aa3.74□□□□□ -1.81
COPA-204ENST00000481522 COL1A1P02452 1464 aaPredicted RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 A0A1B0GVM2 712 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 J3KRW8 73 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 TFP02787 698 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 ETFAP13804 333 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 CD58P19256 250 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 PAX3P23760 479 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 CHATP28329 748 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 EPHA8P29322 1005 aaPredicted RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 GABRB2P47870 512 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 EIF3BP55884 814 aaKnown RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 SEC61A1P61619 476 aaKnown RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 RNPS1Q15287 305 aaKnown RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 SOWAHAQ2M3V2 549 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 TCTN1Q2MV58 587 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 LRRC8EQ6NSJ5 796 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 KLHL24Q6TFL4 600 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 C18orf65Q6ZTR6 163 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 SLC46A3Q7Z3Q1 461 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 CADM4Q8NFZ8 388 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 SNAPC3Q92966 411 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 RTP4Q96DX8 246 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 FAM84BQ96KN1 310 aaPredicted RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 MMTAG2Q9BU76 263 aaKnown RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 IRAK4Q9NWZ3 460 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 CISD1Q9NZ45 108 aaKnown RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 OR6C3Q9NZP0 311 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 AGO1Q9UL18 857 aaKnown RBP3.73□□□□□ -1.81
COPA-204ENST00000481522 A4GNTQ9UNA3 340 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 NAALADL1Q9UQQ1 740 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 SLC45A1Q9Y2W3 748 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 CREBBPQ92793 2442 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 BOD1L1Q8NFC6 3051 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 CACNA1HO95180 2353 aa3.73□□□□□ -1.81
COPA-204ENST00000481522 ADGRB1O14514 1584 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 FREM2Q5SZK8 3169 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 TLN1Q9Y490 2541 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 NBPF19A0A087WUL8 3843 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 A0A1W2PPH5 198 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 A0A1W2PQM1 296 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 PLSCR5A0PG75 271 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 DYTNA2CJ06 578 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 LRRC53A6NM62 1247 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 TIMM23O14925 209 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 LDLRAD4O15165 306 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 EPB41L2O43491 1005 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 VNN2O95498 520 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 GPTP24298 496 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 CPOXP36551 454 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 HARS2P49590 506 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 MXI1P50539 228 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 RRP1P56182 461 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 GRIK3Q13003 919 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 GSTA3Q16772 222 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 ATF7IPQ6VMQ6 1270 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 SHFQ7M4L6 423 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 R3HCC1LQ7Z5L2 792 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 TDRPQ86YL5 185 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 DHX40Q8IX18 779 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 DCP1BQ8IZD4 617 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 CNTROBQ8N137 903 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 CLIP4Q8N3C7 705 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 AADATQ8N5Z0 425 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 SCCPDHQ8NBX0 429 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 ARRDC2Q8TBH0 407 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 RFFLQ8WZ73 363 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 NR1H4Q96RI1 486 aaPredicted RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 FIZ1Q96SL8 496 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 SLC25A33Q9BSK2 321 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 MAGEE1Q9HCI5 957 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 OCIAD1Q9NX40 245 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 ZNF69Q9UC07 566 aa3.72□□□□□ -1.81
COPA-204ENST00000481522 FBN1P35555 2871 aaKnown RBP3.72□□□□□ -1.81
COPA-204ENST00000481522 KDM3AQ9Y4C1 1321 aa3.71□□□□□ -1.81
COPA-204ENST00000481522 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 CLEC18AA5D8T8 446 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 USP17L23D6RBM5 183 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 NPIPB11E5RHQ5 1161 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 PI4K2BG5E9Z4 385 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 TAF4O00268 1085 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 KLK8O60259 260 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 RTN3O95197 1032 aaPredicted RBP3.71□□□□□ -1.82
COPA-204ENST00000481522 MBD4O95243 580 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 CH25HO95992 272 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 HOXB5P09067 269 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 UBL4AP11441 157 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 ITGAXP20702 1163 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 AGAP20933 346 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 DDIT3P35638 169 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 GNAQP50148 359 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 CCR9P51686 369 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 GAS1P54826 345 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 MRPS5P82675 430 aaKnown RBP3.71□□□□□ -1.82
COPA-204ENST00000481522 MPP1Q00013 466 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 NEDD9Q14511 834 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 SLC39A14Q15043 492 aa3.71□□□□□ -1.82
COPA-204ENST00000481522 KRTAP21-3Q3LHN1 58 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms