RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ESRP1Q6NXG1 681 aaKnown RBP12.17□□□□□ -0.46
TRA2B-212ENST00000480461 ZDHHC24Q6UX98 284 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 NRSN1Q8IZ57 195 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 CEP112Q8N8E3 955 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 MFSD2AQ8NA29 543 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 CCHCR1Q8TD31 782 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
TRA2B-212ENST00000480461 AP2M1Q96CW1 435 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 NUS1Q96E22 293 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 SNF8Q96H20 258 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-212ENST00000480461 SRPK1Q96SB4 655 aaKnown RBP12.17□□□□□ -0.46
TRA2B-212ENST00000480461 WDR83Q9BRX9 315 aaKnown RBP12.17□□□□□ -0.46
TRA2B-212ENST00000480461 APOOQ9BUR5 198 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 SUDS3Q9H7L9 328 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-212ENST00000480461 UGT1A7Q9HAW7 530 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 UGT1A10Q9HAW8 530 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 UGT1A8Q9HAW9 530 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 PLAC1Q9HBJ0 212 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 GPR27Q9NS67 375 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 SYBUQ9NX95 663 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 ANAPC5Q9UJX4 755 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 BPTFQ12830 3046 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 PLXNA2O75051 1894 aa12.17□□□□□ -0.46
TRA2B-212ENST00000480461 ESYT3A0FGR9 886 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 C2orf81A6NN90 581 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 TLR4O00206 839 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 FPGTO14772 594 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 TRIM16O95361 564 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 MLNP12872 115 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 ADRA1DP25100 572 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 NMBRP28336 390 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 CDKN1CP49918 316 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 AFF3P51826 1226 aaKnown RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 PEX6Q13608 980 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 MORF4L2Q15014 288 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 CHRNA6Q15825 494 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 DUOXA1Q1HG43 343 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 KIF19Q2TAC6 998 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 PCID2Q5JVF3 399 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 DNTTIP2Q5QJE6 756 aaKnown RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 SLC23A3Q6PIS1 610 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 ZNF765Q7L2R6 523 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 HOOK3Q86VS8 718 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 RAVER1Q8IY67 606 aaKnown RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 DENND6BQ8NEG7 585 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 OR13J1Q8NGT2 312 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 OR2I1PQ8NGU4 316 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 ART4Q93070 314 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 CDKN2AIPNLQ96HQ2 116 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 TBATAQ96M53 351 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 FCRL3Q96P31 734 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 RANBP9Q96S59 729 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 KIFC1Q9BW19 673 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 NUSAP1Q9BXS6 441 aaKnown RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 TEX101Q9BY14 249 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 NLE1Q9NVX2 485 aaPredicted RBP12.16□□□□□ -0.46
TRA2B-212ENST00000480461 PKD2L2Q9NZM6 624 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 WHRNQ9P202 907 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 KLF15Q9UIH9 416 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 FKBPLQ9UIM3 349 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 ANKRD6Q9Y2G4 727 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
TRA2B-212ENST00000480461 TMEM202A6NGA9 273 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 OR51F1A6NGY5 319 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 SDR42E2A6NKP2 422 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 STX7O15400 261 aaKnown RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 CRTAMO95727 393 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 PRSS56P0CW18 603 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 THEGLP0DJG4 465 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 HOXD12P35452 270 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 CTSKP43235 329 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 POLD2P49005 469 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 NXPH1P58417 271 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 DCDC1P59894 354 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 GUCY2DQ02846 1103 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 ACVR1Q04771 509 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 CBLBQ13191 982 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 SEPT6Q14141 434 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 FZD2Q14332 565 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 ATP13A5Q4VNC0 1218 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 KHDC1Q4VXA5 237 aaKnown RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 HP1BP3Q5SSJ5 553 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 ZNF648Q5T619 568 aaPredicted RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 TSTD2Q5T7W7 516 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 C8orf74Q6P047 294 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
TRA2B-212ENST00000480461 PCGF5Q86SE9 256 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 TRIM74Q86UV6 250 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 MFSD3Q96ES6 412 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 KLHDC7BQ96G42 594 aa12.15□□□□□ -0.46
TRA2B-212ENST00000480461 COX14Q96I36 57 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms