RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 LHCGRP22888 699 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 MAT2AP31153 395 aaKnown RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 HNF1BP35680 557 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 TRIM23P36406 574 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 KCNJ1P48048 391 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 NUMBP49757 651 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 YPEL5P62699 121 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 ILF2Q12905 390 aaKnown RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 CNGA3Q16281 694 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 DUPD1Q68J44 220 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CCDC70Q6NSX1 233 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 LRRC8BQ6P9F7 803 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 ZNF449Q6P9G9 518 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 KYAT3Q6YP21 454 aaKnown RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 GCNT7Q6ZNI0 430 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 ZNF534Q76KX8 674 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 GSTA5Q7RTV2 222 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 TECPR1Q7Z6L1 1165 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 TTC7BQ86TV6 843 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CTAGE6Q86UF2 777 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 DCP2Q8IU60 420 aaKnown RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 RELL1Q8IUW5 271 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CCNJLQ8IV13 435 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CTAGE4Q8IX94 777 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 RYBPQ8N488 228 aaPredicted RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 TTC30BQ8N4P2 665 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 OR6K2Q8NGY2 324 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 SPATA22Q8NHS9 363 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 SNRNP27Q8WVK2 155 aaKnown RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 FGF11Q92914 225 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 NXPE2Q96DL1 559 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 DTD2Q96FN9 168 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 SNF8Q96H20 258 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CAPZA3Q96KX2 299 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CEP41Q9BYV8 373 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 TSPYL1Q9H0U9 437 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 SEPT10Q9P0V9 454 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 BSNQ9UPA5 3926 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 NAV2Q8IVL1 2488 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 A0A1W2PNU3 283 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 MAGEB16A2A368 324 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 HEATR9A2RTY3 570 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 NPIPB15A6NHN6 443 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 SCAMP1O15126 338 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 ATXN7O15265 892 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 EIF3HO15372 352 aaKnown RBP eCLIP8.87□□□□□ -0.99
DDX56-211ENST00000479602 PIAS2O75928 621 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 TM7SF2O76062 418 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CRTAMO95727 393 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 MT-CO3P00414 261 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CSF2P04141 144 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 GP1BAP07359 652 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 APRTP07741 180 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 ELFN1P0C7U0 828 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 THEGLP0DJG4 465 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 GM2AP17900 193 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 HNRNPA2B1P22626 353 aaKnown RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 TNFRSF8P28908 595 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 GKP32189 559 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 HADHAP40939 763 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 NPY2RP49146 381 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 ZNF140P52738 457 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 EPHB1P54762 984 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 TLE3Q04726 772 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 ITKQ08881 620 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 MTM1Q13496 603 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 SNX1Q13596 522 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 FZD2Q14332 565 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 TAF1AQ15573 450 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 TBC1D25Q3MII6 688 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 SIRPB2Q5JXA9 342 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 HENMT1Q5T8I9 393 aaKnown RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 HIBCHQ6NVY1 386 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 IGF2-ASQ6U949 168 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CRTC1Q6UUV9 634 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CEP128Q6ZU80 1094 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CYS1Q717R9 158 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 OR13H1Q8NG92 308 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CENPTQ96BT3 561 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 VPS35Q96QK1 796 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 UBL7Q96S82 380 aaPredicted RBP8.87□□□□□ -0.99
DDX56-211ENST00000479602 FAM118BQ9BPY3 351 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 KIFC1Q9BW19 673 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 ZFYVE1Q9HBF4 777 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 SMARCAL1Q9NZC9 954 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 IL17CQ9P0M4 197 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 KLF15Q9UIH9 416 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CLCA2Q9UQC9 943 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 CHKBQ9Y259 395 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 ZNF711Q9Y462 761 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 TTLL3Q9Y4R7 772 aa8.87□□□□□ -0.99
DDX56-211ENST00000479602 SPTY2D1-AS1A0A0U1RR47 76 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 KLHL33A6NCF5 533 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 POM121BA6NF01 834 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 RAD51BO15315 384 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 SLC31A1O15431 190 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 RAD51CO43502 376 aa8.86□□□□□ -0.99
DDX56-211ENST00000479602 LDB2O43679 373 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms