RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PIM3Q86V86 326 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF843Q8N446 348 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 SLC37A2Q8TED4 501 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 HAUS1Q96CS2 278 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 CCDC42Q96M95 316 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 MLPHQ9BV36 600 aaPredicted RBP17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 IGHV5-10-1A0A0J9YXX1 117 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 DNAJC6O75061 913 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 PNLIPP16233 465 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 PECAM1P16284 738 aaPredicted RBP17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 COMTP21964 271 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 TEAD1P28347 426 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 SLC9A4Q6AI14 798 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 EXD1Q8NHP7 514 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 MAK16Q9BXY0 300 aaKnown RBP17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 KCTD5Q9NXV2 234 aa17.25■□□□□ 0.35
ECHDC1-216ENST00000479525 AHCTF1Q8WYP5 2266 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 IGHV1OR21-1A0A087WYE8 117 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 A8MU76 341 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 ANKRD66B4E2M5 251 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 K7ENP7 123 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 AURKAO14965 403 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 MTX2O75431 263 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 CPNE6O95741 557 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 TPM1P09493 284 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 WT1P19544 449 aaPredicted RBP17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 MAPK9P45984 424 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 MARCKSL1P49006 195 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 UCNP55089 124 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 IFI35P80217 286 aaPredicted RBP17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 ADCY2Q08462 1091 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 C19orf57Q0VDD7 668 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 NFATC2Q13469 925 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 HENMT1Q5T8I9 393 aaKnown RBP17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 INO80CQ6PI98 192 aaPredicted RBP17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 CRTC3Q6UUV7 619 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF765Q7L2R6 523 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF438Q7Z4V0 828 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 GPR26Q8NDV2 337 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 TTC9Q92623 222 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 SCARF2Q96GP6 870 aaPredicted RBP17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 CCNL2Q96S94 520 aaPredicted RBP17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 SPATA16Q9BXB7 569 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 FAM83DQ9H4H8 585 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 BPIFA1Q9NP55 256 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 KCNK4Q9NYG8 393 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 PKD2L2Q9NZM6 624 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 TBC1D29Q9UFV1 150 aa17.24■□□□□ 0.35
ECHDC1-216ENST00000479525 ERVH48-1M5A8F1 160 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 SPOPO43791 374 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 PMPCBO75439 489 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 CA4P22748 312 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 ARSDP51689 593 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 CYP4F2P78329 520 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 EIF3IQ13347 325 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 ODF2Q5BJF6 829 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 NT5DC3Q86UY8 548 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 NRSN1Q8IZ57 195 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 CCDC97Q96F63 343 aaPredicted RBP17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 OLFM3Q96PB7 478 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 TRIB3Q96RU7 358 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 CMKLR1Q99788 373 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 OR2AG1Q9H205 316 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 C10orf88Q9H8K7 445 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 ATXN10Q9UBB4 475 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 AMACRQ9UHK6 382 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 SPO11Q9Y5K1 396 aa17.23■□□□□ 0.35
ECHDC1-216ENST00000479525 AKR1B15C9JRZ8 316 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 TMX2-CTNND1H3BSU7 103 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 FGF3P11487 239 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF8P17098 575 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 PTMSP20962 102 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 CES1P23141 567 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 RHOT2Q8IXI1 618 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 FATE1Q969F0 183 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 IMP4Q96G21 291 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 LYSMD1Q96S90 227 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 OSGEPL1Q9H4B0 414 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 ZFYVE1Q9HBF4 777 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 PRDM8Q9NQV8 689 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 OCIAD1Q9NX40 245 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 KLHL3Q9UH77 587 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF711Q9Y462 761 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 PCDHGA7Q9Y5G6 932 aa17.22■□□□□ 0.35
ECHDC1-216ENST00000479525 GPR39O43194 453 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 MTA2O94776 668 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 PTPN3P26045 913 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 NR1D2Q14995 579 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 SEPT7Q16181 437 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 KHDC1Q4VXA5 237 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 ZC3H18Q86VM9 953 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 FAM129CQ86XR2 697 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 RHOT1Q8IXI2 618 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 SLC25A41Q8N5S1 370 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 CCHCR1Q8TD31 782 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 SLC38A3Q99624 504 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 TBC1D10AQ9BXI6 508 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 GPR63Q9BZJ6 419 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms