RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 C19orf18Q8NEA5 215 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 FBXO30Q8TB52 745 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 UTP15Q8TED0 518 aaKnown RBP14.28□□□□□ -0.12
COL20A1-206ENST00000479501 DEPDC7Q96QD5 511 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 TCF12Q99081 682 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 AHSPQ9NZD4 102 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 TBC1D30Q9Y2I9 924 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 TIMM22Q9Y584 194 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 MAST2Q6P0Q8 1798 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 SLC38A8A6NNN8 435 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 GPR32O75388 356 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 SLC22A3O75751 556 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 NELFEP18615 380 aaKnown RBP14.28□□□□□ -0.12
COL20A1-206ENST00000479501 PRDX6P30041 224 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 SPPL2AQ8TCT8 520 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 CAPNS2Q96L46 248 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 OSBPL11Q9BXB4 747 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 RAB6CQ9H0N0 254 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 SMOC2Q9H3U7 446 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 PCDHB1Q9Y5F3 818 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 DHRS12A0PJE2 317 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 NEMP2A6NFY4 417 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 MAP3K13O43283 966 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 NPHS1O60500 1241 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 IL12RB1P42701 662 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 TIFABQ6ZNK6 161 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 ZNF554Q86TJ5 538 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 GALNT15Q8N3T1 639 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 ZNF276Q8N554 614 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 RAD21L1Q9H4I0 556 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 KLHL3Q9UH77 587 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 EFCAB14O75071 495 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 BEST1O76090 585 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 CXCL14O95715 111 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 F7P08709 466 aaPredicted RBP14.27□□□□□ -0.12
COL20A1-206ENST00000479501 GRK3P35626 688 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 HPCAP84074 193 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 NCF4Q15080 339 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 ACSBG2Q5FVE4 666 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 ABRAXAS1Q6UWZ7 409 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 TMEM26Q6ZUK4 368 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 C8orf59Q8N0T1 100 aaPredicted RBP14.27□□□□□ -0.12
COL20A1-206ENST00000479501 APOL4Q9BPW4 351 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 HOPXQ9BPY8 73 aaPredicted RBP14.27□□□□□ -0.12
COL20A1-206ENST00000479501 CLK4Q9HAZ1 481 aaKnown RBP14.27□□□□□ -0.12
COL20A1-206ENST00000479501 OXSMQ9NWU1 459 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 HS3ST4Q9Y661 456 aa14.27□□□□□ -0.12
COL20A1-206ENST00000479501 RECQL5O94762 991 aaPredicted RBP14.27□□□□□ -0.13
COL20A1-206ENST00000479501 JAK1P23458 1154 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 RPS24P62847 133 aaKnown RBP14.27□□□□□ -0.13
COL20A1-206ENST00000479501 FBXO48Q5FWF7 155 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 TTC23Q5W5X9 447 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 ZC3HC1Q86WB0 502 aaKnown RBP14.27□□□□□ -0.13
COL20A1-206ENST00000479501 TWIST2Q8WVJ9 160 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 RMI1Q9H9A7 625 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 BTBD3Q9Y2F9 522 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 PSAT1Q9Y617 370 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 BBIP1A8MTZ0 92 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 AHSGP02765 367 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 INHAP05111 366 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 FESP07332 822 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 GSSP48637 474 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 GPR15P49685 360 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 SLC10A2Q12908 348 aaPredicted RBP14.27□□□□□ -0.13
COL20A1-206ENST00000479501 FNDC3BQ53EP0 1204 aaKnown RBP14.27□□□□□ -0.13
COL20A1-206ENST00000479501 NECAB2Q7Z6G3 386 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 DSG4Q86SJ6 1040 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 TMEM199Q8N511 208 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 ATL1Q8WXF7 558 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 TMCC3Q9ULS5 477 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 PADI4Q9UM07 663 aa14.27□□□□□ -0.13
COL20A1-206ENST00000479501 GABRDO14764 452 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 LAG3P18627 525 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 RPS6KA3P51812 740 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 CLCQ05315 142 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 LCP2Q13094 533 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 ZIK1Q3SY52 487 aaPredicted RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 POM121L1PQ3SYA9 428 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 SMG8Q8ND04 991 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 C2orf15Q8WU43 125 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 ZNF510Q9Y2H8 683 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 SLC28A1O00337 649 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 TRMUO75648 421 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 RFPL1O75677 317 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 SLC25A14O95258 325 aaPredicted RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 TOP3BO95985 862 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 COX7A2P14406 83 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 CCNA2P20248 432 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 KRT20P35900 424 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 MTTPP55157 894 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 C1DQ13901 141 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 BROXQ5VW32 411 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 MSANTD2Q6P1R3 559 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 FEM1CQ96JP0 617 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms