RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 NECAB2Q7Z6G3 386 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PPIL6Q8IXY8 311 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CAMKVQ8NCB2 501 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MCFD2Q8NI22 146 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CERS2Q96G23 380 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ZNF419Q96HQ0 510 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 GAD1Q99259 594 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ZNF436Q9C0F3 470 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 BRD9Q9H8M2 597 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 RBAKQ9NYW8 714 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 ARMCX1Q9P291 453 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 GTF2IRD1Q9UHL9 959 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 NUDT5Q9UKK9 219 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 NOVA2Q9UNW9 492 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CCDC195A0A1B0GUA6 201 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 USP17L5A8MUK1 530 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 NOS1APO75052 506 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 RCBTB2O95199 551 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 GLUD1P00367 558 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 APRTP07741 180 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CETPP11597 493 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FAHP16930 419 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ALDH9A1P49189 494 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 RGS19P49795 217 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MLLT10P55197 1068 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CTSWP56202 376 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 S100A10P60903 97 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SLC35A2P78381 396 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 BNIP2Q12982 314 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 BLMHQ13867 455 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TNFAIP8L2Q6P589 184 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 CPXM2Q8N436 756 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HORMAD2Q8N7B1 307 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CEP76Q8TAP6 659 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CASKIN2Q8WXE0 1202 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SHC3Q92529 594 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 OXNAD1Q96HP4 312 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 FAM126AQ9BYI3 521 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 FN3KQ9H479 309 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MARCH7Q9H992 704 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 EMILIN3Q9NT22 766 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FAM86C1Q9NVL1 165 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CHPF2Q9P2E5 772 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ACSL6Q9UKU0 697 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TRAF6Q9Y4K3 522 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CREBL2O60519 120 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TGM2P21980 687 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ACSL1P33121 698 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HNF4AP41235 474 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CDK8P49336 464 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FXR2P51116 673 aaKnown RBP eCLIP5.41□□□□□ -1.54
USF3-202ENST00000478658 E2F2Q14209 437 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 XKR3Q5GH77 459 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HEATR4Q86WZ0 1026 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CBWD2Q8IUF1 395 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SLC15A3Q8IY34 581 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 EFCAB3Q8N7B9 438 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FAM47BQ8NA70 645 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HM13Q8TCT9 377 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PXYLP1Q8TE99 480 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FCGR1BQ92637 280 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ATP6V1G3Q96LB4 118 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PTCHD1Q96NR3 888 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SEZ6LQ9BYH1 1024 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SRA1Q9HD15 236 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.41□□□□□ -1.54
USF3-202ENST00000478658 DCTN4Q9UJW0 460 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 MYOM2P54296 1465 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CAMSAP1Q5T5Y3 1602 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SDR42E2A6NKP2 422 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 POLRMTO00411 1230 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 VIL1P09327 827 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 PGAM2P15259 253 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PSMB9P28065 219 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SNRPD1P62314 119 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 GALK2Q01415 458 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 EXOC3L2Q2M3D2 409 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ALG1LQ6GMV1 187 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CYP2U1Q7Z449 544 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CPA6Q8N4T0 437 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 CNTD1Q8N815 330 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 TDRD5Q8NAT2 981 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 RFFLQ8WZ73 363 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 FAM49AQ9H0Q0 323 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 POLR3FQ9H1D9 316 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 TMEM63CQ9P1W3 806 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 EXOGQ9Y2C4 368 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 DNMT1P26358 1616 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 RIC1Q4ADV7 1423 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 MPPED1O15442 326 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 HCRTR2O43614 444 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SEC14L2O76054 403 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 PSMA1P25786 263 aaKnown RBP5.41□□□□□ -1.54
USF3-202ENST00000478658 RAB7AP51149 207 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 ERVK-16P61578 105 aa5.41□□□□□ -1.54
USF3-202ENST00000478658 SLC25A3Q00325 362 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms