RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPR18Q14330 331 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 FGFBP1Q14512 234 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 CRYMQ14894 314 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 WTAPQ15007 396 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PPP2R5BQ15173 497 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 HSPB2Q16082 182 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PLEKHS1Q5SXH7 462 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM154Q6P9G4 183 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 KLHL35Q6PF15 583 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 GSTA5Q7RTV2 222 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 SZRD1Q7Z422 152 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 CUZD1Q86UP6 607 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 TICAM2Q86XR7 235 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 DENND6AQ8IWF6 608 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 ADGRF2Q8IZF7 708 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PRR26Q8N8Z3 221 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 ERP27Q96DN0 273 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 MMABQ96EY8 250 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 BBS4Q96RK4 519 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 DCLK3Q9C098 648 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 B3GNT4Q9C0J1 378 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 CDT1Q9H211 546 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 KLHL31Q9H511 634 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 C6orf106Q9H6K1 298 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 MVB12BQ9H7P6 319 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 POLR1BQ9H9Y6 1135 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC6A13Q9NSD5 602 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 ANKRD10Q9NXR5 420 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 DLGAP2Q9P1A6 1054 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 ADD3Q9UEY8 706 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 NDRG3Q9UGV2 375 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 FAM96BQ9Y3D0 163 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PCDHGB1Q9Y5G3 927 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PTGDR2Q9Y5Y4 395 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 RPS6KL1Q9Y6S9 549 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 RREB1Q92766 1687 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLIT3O75094 1523 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 SBNO1A3KN83 1393 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 A0A1B0GVT2 93 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 FRMD3A2A2Y4 597 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 OR6C75A6NL08 312 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 INAFM1C9JVW0 142 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 SCAMP1O15126 338 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 SEC14L5O43304 696 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 GRID2O43424 1007 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 KLK8O60259 260 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 CLDN7O95471 211 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 KLKB1P03952 638 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 RARGP13631 454 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 AGAP20933 346 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 DCTDP32321 178 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 RFC1P35251 1148 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 RGS19P49795 217 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 NUCB1Q02818 461 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 CEBPZQ03701 1054 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 RUNX2Q13950 521 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 FRG1Q14331 258 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 RILPL1Q5EBL4 403 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 C9orf50Q5SZB4 431 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC16A12Q6ZSM3 486 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 GALNT5Q7Z7M9 940 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 RBFAQ8N0V3 343 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 GJC3Q8NFK1 279 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 LMO3Q8TAP4 145 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM163Q8TC26 289 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 PABPC5Q96DU9 382 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 PHF21BQ96EK2 531 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 WDFY2Q96P53 400 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLITRK1Q96PX8 696 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 YME1L1Q96TA2 773 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 MXRA8Q9BRK3 442 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 TM6SF1Q9BZW5 370 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 KAT14Q9H8E8 782 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 PLAC1Q9HBJ0 212 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 ANKEF1Q9NU02 776 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 CTNNAL1Q9UBT7 734 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 ICAM5Q9UMF0 924 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 AAR2Q9Y312 384 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 A3GALT2U3KPV4 340 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLIT2O94813 1529 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 PASKQ96RG2 1323 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 ARHGEF10O15013 1369 aa4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 BRD4O60885 1362 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-212ENST00000478573 ATRNO75882 1429 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CAMTA1Q9Y6Y1 1673 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 hCG_1807616A0A1W2PRN6 198 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CDRT15L2A8MXV6 281 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 GAS8-AS1O95177 125 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 COMPP49747 757 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CRYZQ08257 329 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 GRIK3Q13003 919 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CHAF1BQ13112 559 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 TCTN1Q2MV58 587 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 SOWAHCQ53LP3 525 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 Q5PR19 223 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 GFI1BQ5VTD9 330 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 JADE1Q6IE81 842 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 HEPHL1Q6MZM0 1159 aa4.13□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM71Q6P5X7 295 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms