RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 MFSD7Q6UXD7 560 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 NPNTQ6UXI9 565 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 CCDC81Q6ZN84 652 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 TMPRSS9Q7Z410 1059 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 PATE1Q8WXA2 126 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 TADA1Q96BN2 335 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 WBP1Q96G27 269 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 TRIB3Q96RU7 358 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 DPYSL5Q9BPU6 564 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 TRIM5Q9C035 493 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 B3GNT4Q9C0J1 378 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 SEMA6CQ9H3T2 930 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 GLOD4Q9HC38 313 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 SEPT10Q9P0V9 454 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 PISDQ9UG56 409 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 HYOU1Q9Y4L1 999 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 ALG6Q9Y672 507 aa13.66□□□□□ -0.22
RCC1-211ENST00000478232 FADS2P1A8MWK0 482 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 K7ENP7 123 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 ERVH48-1M5A8F1 160 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 HGSO14964 777 aaPredicted RBP13.65□□□□□ -0.22
RCC1-211ENST00000478232 DNAJC6O75061 913 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 LCA5LO95447 670 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 CDKN2BP42772 138 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 FASLGP48023 281 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 DYNLT1P63172 113 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 TRA2AQ13595 282 aaKnown RBP eCLIP13.65□□□□□ -0.22
RCC1-211ENST00000478232 GALNT3Q14435 633 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 TMEM164Q5U3C3 297 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
RCC1-211ENST00000478232 ZNF574Q6ZN55 896 aaPredicted RBP13.65□□□□□ -0.22
RCC1-211ENST00000478232 CHST15Q7LFX5 561 aaPredicted RBP13.65□□□□□ -0.22
RCC1-211ENST00000478232 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 KDELC2Q7Z4H8 507 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 TMC3Q7Z5M5 1100 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 EID2BQ96D98 161 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 TEKT5Q96M29 485 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 CCNL2Q96S94 520 aaPredicted RBP13.65□□□□□ -0.22
RCC1-211ENST00000478232 CEP41Q9BYV8 373 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 CARD9Q9H257 536 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 TRIM39Q9HCM9 518 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 OAS3Q9Y6K5 1087 aaKnown RBP13.65□□□□□ -0.22
RCC1-211ENST00000478232 UNC13CQ8NB66 2214 aa13.65□□□□□ -0.22
RCC1-211ENST00000478232 TRBV23OR9-2A0A075B6M9 112 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 IGHV1OR21-1A0A087WYE8 117 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 IGHV5-10-1A0A0J9YXX1 117 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 MTSS1O43312 755 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 PSTPIP1O43586 416 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 CST8O60676 142 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
RCC1-211ENST00000478232 NDST3O95803 873 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 ITIH1P19827 911 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 LIMK2P53671 638 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 DCDC1P59894 354 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 GPLD1P80108 840 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 C16orf72Q14CZ0 275 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 PRKD1Q15139 912 aaPredicted RBP13.64□□□□□ -0.23
RCC1-211ENST00000478232 PCSK7Q16549 785 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 SPOCD1Q6ZMY3 1216 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 SFRP1Q8N474 314 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 TC2NQ8N9U0 490 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 OR4D9Q8NGE8 314 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
RCC1-211ENST00000478232 P3H4Q92791 437 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 USP7Q93009 1102 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 SH3KBP1Q96B97 665 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 NUDT22Q9BRQ3 303 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 ZSCAN5AQ9BUG6 496 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 SPATA16Q9BXB7 569 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 GPR63Q9BZJ6 419 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 LUC7LQ9NQ29 371 aaKnown RBP13.64□□□□□ -0.23
RCC1-211ENST00000478232 KCNK4Q9NYG8 393 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 NFKBIL1Q9UBC1 381 aaPredicted RBP13.64□□□□□ -0.23
RCC1-211ENST00000478232 SAE1Q9UBE0 346 aaPredicted RBP13.64□□□□□ -0.23
RCC1-211ENST00000478232 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
RCC1-211ENST00000478232 PRKAB1Q9Y478 270 aa13.64□□□□□ -0.23
RCC1-211ENST00000478232 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
RCC1-211ENST00000478232 KIF26BQ2KJY2 2108 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 A0A0A6YYK5 440 aaPredicted RBP13.63□□□□□ -0.23
RCC1-211ENST00000478232 OR5K4A6NMS3 321 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 GPR89AB7ZAQ6 455 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 GRID2O43424 1007 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 NUAK1O60285 661 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 SLC25A14O95258 325 aaPredicted RBP13.63□□□□□ -0.23
RCC1-211ENST00000478232 EPOP01588 193 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 GPR89BP0CG08 455 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 LIPCP11150 499 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 SLC2A4P14672 509 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 PTPN3P26045 913 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 CD82P27701 267 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 MAPK10P53779 464 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 SPA17Q15506 151 aa13.63□□□□□ -0.23
RCC1-211ENST00000478232 TAF1BQ53T94 588 aaPredicted RBP13.63□□□□□ -0.23
RCC1-211ENST00000478232 TFDP3Q5H9I0 405 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms