RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 RHOT1Q8IXI2 618 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 SYCE1Q8N0S2 351 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TAGAPQ8N103 731 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TCAIMQ8N3R3 496 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 RASGEF1CQ8N431 466 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 BBS1Q8NFJ9 593 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 OR8K5Q8NH50 307 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 UBA3Q8TBC4 463 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM71BQ8TC56 605 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 URGCPQ8TCY9 931 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 ASZ1Q8WWH4 475 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 EXTL1Q92935 676 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 AZIN2Q96A70 460 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 RAD51AP1Q96B01 352 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 COA7Q96BR5 231 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 ERO1AQ96HE7 468 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC41A2Q96JW4 573 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 MSLNLQ96KJ4 702 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 INPP4AQ96PE3 977 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TWNKQ96RR1 684 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 CYTH2Q99418 400 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 PIP5K1AQ99755 562 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 GDF15Q99988 308 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 KCNS3Q9BQ31 491 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 EDEM2Q9BV94 578 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TUBB2BQ9BVA1 445 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 FRMD8P1Q9BZ68 369 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 CPEB1Q9BZB8 566 aaKnown RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 GPR63Q9BZJ6 419 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TWSG1Q9GZX9 223 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 RAB33BQ9H082 229 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 LRRC40Q9H9A6 602 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 PCDH9Q9HC56 1237 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 SAYSD1Q9NPB0 183 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC35C2Q9NQQ7 365 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TM7SF3Q9NS93 570 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 ZDHHC18Q9NUE0 388 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 TDP1Q9NUW8 608 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 DDX43Q9NXZ2 648 aaKnown RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 SMPD3Q9NY59 655 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 PI4KBQ9UBF8 816 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 DBF4Q9UBU7 674 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 AJAP1Q9UKB5 411 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF215Q9UL58 517 aaPredicted RBP3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 SNX6Q9UNH7 406 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 DTX4Q9Y2E6 619 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 MYRFQ9Y2G1 1151 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 LYVE1Q9Y5Y7 322 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 PSAT1Q9Y617 370 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 STON1Q9Y6Q2 735 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 CROCC2H7BZ55 1655 aa3.54□□□□□ -1.84
FNDC3B-209ENST00000478016 NPATQ14207 1427 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 CEP152O94986 1710 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 ABCC11Q96J66 1382 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 ZC3H13Q5T200 1668 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 PHLPP2Q6ZVD8 1323 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 DNMT1P26358 1616 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 RNF17Q9BXT8 1623 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 A0A0U1RQS6 177 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 A0A1B0GTQ1 180 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 hCG_1809904A0A1W2PP81 198 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 A0A1W2PPE2 198 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 A0A1W2PR64 198 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 DENND3A2RUS2 1198 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8JA6NMD2 632 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 CXorf49A8MYA2 514 aaPredicted RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8TH3BQL2 631 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 TRIM38O00635 465 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 HNRNPRO43390 633 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 HTRA2O43464 458 aaPredicted RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GATCO43716 136 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 SMIM24O75264 130 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GPR32O75388 356 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 MED24O75448 989 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 CIAO1O76071 339 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 MFN2O95140 757 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 IL18RAPO95256 599 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 KRT6BP04259 564 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 EIF2S1P05198 315 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 RPLP2P05387 115 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 LIPFP07098 398 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 TUBBP07437 444 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 INHBAP08476 426 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 HNRNPA1P09651 372 aaKnown RBP eCLIP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8HP0CJ92 632 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 RAP2AP10114 183 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GHRP10912 638 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 RALBP11234 206 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GJA1P17302 382 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 DDX5P17844 614 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 ATF6P18850 670 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 CYP2B6P20813 491 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 ITGB8P26012 769 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 MGAT1P26572 445 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 GIFP27352 417 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 RPA1P27694 616 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 TKTP29401 623 aaKnown RBP3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 CCND2P30279 289 aa3.53□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC5A2P31639 672 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms