RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ATP8A2Q9NTI2 1148 aa4.88□□□□□ -1.63
VPS50-214ENST00000477935 KLQ9UEF7 1012 aa4.88□□□□□ -1.63
VPS50-214ENST00000477935 SPTA1P02549 2419 aa4.88□□□□□ -1.63
VPS50-214ENST00000477935 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 CCNT1O60563 726 aaKnown RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 HLA-DQA2P01906 255 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 KLKB1P03952 638 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 ALPLP05186 524 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 DCNP07585 359 aaKnown RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 CSF1P09603 554 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 GRK6P43250 576 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 HTR6P50406 440 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 RAPGEF1Q13905 1077 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 BAATQ14032 418 aaPredicted RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 C12orf60Q5U649 245 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 LVRNQ6Q4G3 990 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 GALNT7Q86SF2 657 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 ZDHHC17Q8IUH5 632 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 MAML2Q8IZL2 1156 aaPredicted RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 FAM185AQ8N0U4 392 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 ATP6V0A1Q93050 837 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 KTI12Q96EK9 354 aaPredicted RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 DYNLL2Q96FJ2 89 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 HERC2P3Q9BVR0 1158 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 FTHL17Q9BXU8 183 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 TWSG1Q9GZX9 223 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 RBM38Q9H0Z9 239 aaKnown RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 MYLK2Q9H1R3 596 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 PIH1D3Q9NQM4 214 aaKnown RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 SIRT3Q9NTG7 399 aaPredicted RBP4.87□□□□□ -1.63
VPS50-214ENST00000477935 KIF17Q9P2E2 1029 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 TBC1D14Q9P2M4 693 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 RALGAPA2Q2PPJ7 1873 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 ZNF462Q96JM2 2506 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 MCM3APO60318 1980 aa4.87□□□□□ -1.63
VPS50-214ENST00000477935 NBEAQ8NFP9 2946 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 C17orf102A2RUQ5 167 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 TNFRSF13BO14836 293 aaPredicted RBP4.86□□□□□ -1.63
VPS50-214ENST00000477935 SYN3O14994 580 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 TCEA3O75764 348 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 FCGR2AP12318 317 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 CYP4B1P13584 511 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 ITGB6P18564 788 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 ADD2P35612 726 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 PNPLA4P41247 253 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 AARSP49588 968 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS50-214ENST00000477935 RPS6KA3P51812 740 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 STARD6P59095 220 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 CSTF1Q05048 431 aaKnown RBP4.86□□□□□ -1.63
VPS50-214ENST00000477935 ARHGAP1Q07960 439 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 Q5PR19 223 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 WASHC2DQ5SRD0 308 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 PARM1Q6UWI2 310 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 FAM217AQ8IXS0 508 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 DPP10Q8N608 796 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 KDM1BQ8NB78 822 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 PPTC7Q8NI37 304 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 ASB5Q8WWX0 329 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 SDCCAG3Q96C92 435 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 FAM167BQ9BTA0 163 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 ISCUQ9H1K1 167 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 MRPL44Q9H9J2 332 aaKnown RBP4.86□□□□□ -1.63
VPS50-214ENST00000477935 THAP1Q9NVV9 213 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 CLIP2Q9UDT6 1046 aa4.86□□□□□ -1.63
VPS50-214ENST00000477935 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.86□□□□□ -1.63
VPS50-214ENST00000477935 DDX49Q9Y6V7 483 aaKnown RBP4.86□□□□□ -1.63
VPS50-214ENST00000477935 FAM90A8PA6NJQ4 464 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 SPTLC2O15270 562 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 NCAM2O15394 837 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 KCNK5O95279 499 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 TK1P04183 234 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 ICAM1P05362 532 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 FAM90A13PP0C7W8 464 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 FAM90A24PP0C7X0 464 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 ARSAP15289 507 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 HOXC8P31273 242 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 TNFSF8P32971 234 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 THBS3P49746 956 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 RASSF2P50749 326 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 IKQ13123 557 aaPredicted RBP4.85□□□□□ -1.63
VPS50-214ENST00000477935 THOC5Q13769 683 aaKnown RBP4.85□□□□□ -1.63
VPS50-214ENST00000477935 GIT2Q14161 759 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 RUNDC3AQ59EK9 446 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 ZNF484Q5JVG2 852 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 SPOUT1Q5T280 376 aaKnown RBP4.85□□□□□ -1.63
VPS50-214ENST00000477935 SLC9C2Q5TAH2 1124 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 DCLRE1AQ6PJP8 1040 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 CHST3Q7LGC8 479 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 MOGAT3Q86VF5 341 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 THNSL1Q8IYQ7 743 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 MRPL43Q8N983 215 aaKnown RBP4.85□□□□□ -1.63
VPS50-214ENST00000477935 LRRC57Q8N9N7 239 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 C7orf57Q8NEG2 295 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 SDR42E1Q8WUS8 393 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 CCT6BQ92526 530 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 MRPS27Q92552 414 aaKnown RBP4.85□□□□□ -1.63
VPS50-214ENST00000477935 STAMQ92783 540 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 RILPL2Q969X0 211 aa4.85□□□□□ -1.63
VPS50-214ENST00000477935 KLHL5Q96PQ7 755 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms