RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HOXD12P35452 270 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ELK3P41970 407 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ARSDP51689 593 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 PRAMEP78395 509 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ACVR1Q04771 509 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 STAT4Q14765 748 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 HP1BP3Q5SSJ5 553 aaPredicted RBP15.23■□□□□ 0.03
SEC13-215ENST00000477547 PEAR1Q5VY43 1037 aaPredicted RBP15.23■□□□□ 0.03
SEC13-215ENST00000477547 AFTPHQ6ULP2 937 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 CES3Q6UWW8 571 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ABI3BPQ7Z7G0 1075 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 HEATR4Q86WZ0 1026 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 SYT12Q8IV01 421 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ANKMY2Q8IV38 441 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ZBED8Q8IZ13 594 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 TRAM1L1Q8N609 369 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 MFSD3Q96ES6 412 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 CFAP36Q96G28 342 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 LOXL4Q96JB6 756 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 AGAP2Q99490 1192 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 EBNA1BP2Q99848 306 aaKnown RBP15.23■□□□□ 0.03
SEC13-215ENST00000477547 NAT9Q9BTE0 207 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ANKZF1Q9H8Y5 726 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 IL26Q9NPH9 171 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 SEMA4GQ9NTN9 838 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 APPL1Q9UKG1 709 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 PILRBQ9UKJ0 227 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 RPS6KL1Q9Y6S9 549 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 A0A1B0GTW7 788 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 H7C0S8 307 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 INPP4BO15327 924 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 SRP72O76094 671 aaKnown RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 USP1O94782 785 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 PAMP19021 973 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 PSMA3P25788 255 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 TEAD1P28347 426 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 CD38P28907 300 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 MPLP40238 635 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 AFF3P51826 1226 aaKnown RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 ITGA9Q13797 1035 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 INPP5AQ14642 412 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 CRYMQ14894 314 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 SMAD1Q15797 465 aaKnown RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 CHRNA6Q15825 494 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 PDPK2PQ6A1A2 396 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 PNCKQ6P2M8 343 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 ADAMTSL4Q6UY14 1074 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 RABEPKQ7Z6M1 372 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 GSPT2Q8IYD1 628 aaKnown RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 OR13H1Q8NG92 308 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 C1orf216Q8TAB5 229 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 TBATAQ96M53 351 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 SUDS3Q9H7L9 328 aaPredicted RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 ZC3H7BQ9UGR2 993 aaKnown RBP15.22■□□□□ 0.03
SEC13-215ENST00000477547 ANGPTL2Q9UKU9 493 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 NFU1Q9UMS0 254 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 OR1A2Q9Y585 309 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 TEX264Q9Y6I9 313 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 SLC30A1Q9Y6M5 507 aa15.22■□□□□ 0.03
SEC13-215ENST00000477547 A0A1W2PR77 199 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 MAGEB16A2A368 324 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 CCDC162PA2VCL2 907 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 OR51F1A6NGY5 319 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 CFIP05156 583 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 POLBP06746 335 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 RETP07949 1114 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 THEGLP0DJG4 465 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 TNFRSF8P28908 595 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 RABIFP47224 123 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 THOP1P52888 689 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 PFN3P60673 137 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 XIAPP98170 497 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 CDK3Q00526 305 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 PEX6Q13608 980 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 TEAD4Q15561 434 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 ANKRD20A4Q4UJ75 823 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 ATP13A5Q4VNC0 1218 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 ZRANB3Q5FWF4 1079 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 N4BP2L1Q5TBK1 243 aaPredicted RBP15.21■□□□□ 0.03
SEC13-215ENST00000477547 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 CEP128Q6ZU80 1094 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 TRIM74Q86UV6 250 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 NLRP8Q86W28 1048 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 PHYKPLQ8IUZ5 450 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 IGDCC3Q8IVU1 814 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 MFSD2AQ8NA29 543 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
SEC13-215ENST00000477547 OR6P1Q8NGX9 317 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 FAM174AQ8TBP5 190 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 HDAC10Q969S8 669 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 CDKN2AIPNLQ96HQ2 116 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 BMFQ96LC9 184 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 PHPT1Q9NRX4 125 aaPredicted RBP15.21■□□□□ 0.03
SEC13-215ENST00000477547 TMEM74BQ9NUR3 256 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 CRLS1Q9UJA2 301 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 PCDHGA5Q9Y5G8 931 aa15.21■□□□□ 0.03
SEC13-215ENST00000477547 HS3ST3A1Q9Y663 406 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms