RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 RPL26L1Q9UNX3 145 aaKnown RBP6.6□□□□□ -1.35
CCDC30-209ENST00000477155 H7C0S8 307 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 KPNA3O00505 521 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 GAPDHSO14556 408 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TRIM16O95361 564 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 RBP1P09455 135 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CD1DP15813 335 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 XPAP23025 273 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ATP5F1P24539 256 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 KPNA2P52292 529 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 METAP1P53582 386 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 NFATC2Q13469 925 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 DBN1Q16643 649 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ATAT1Q5SQI0 421 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 PTRHD1Q6GMV3 140 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 VITQ6UXI7 678 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CLNKQ7Z7G1 428 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 GBP7Q8N8V2 638 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 OR6Y1Q8NGX8 325 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 RDH11Q8TC12 318 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 EEF1AKMT1Q8WVE0 214 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ECHDC3Q96DC8 303 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 MYADMQ96S97 322 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ILKAPQ9H0C8 392 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 LMAN2LQ9H0V9 348 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 HPS4Q9NQG7 708 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 THG1LQ9NWX6 298 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 UTP6Q9NYH9 597 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 NCKIPSDQ9NZQ3 722 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ZDHHC2Q9UIJ5 367 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 FBXO10Q9UK96 956 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 WASF2Q9Y6W5 498 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 GOLGA8QA0A0J9YX86 632 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 GOLGA8OA6NCC3 632 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 LRRC14BA6NHZ5 514 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 A8MT66 165 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TMEM233B4DJY2 109 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 GOLGA8NF8WBI6 632 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 UBXN8O00124 270 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CDC7O00311 574 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 NEMP1O14524 444 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 FCHO1O14526 889 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 VPS26AO75436 327 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 SUPT7LO94864 414 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 IL1BP01584 269 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TCF3P15923 654 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ITGALP20701 1170 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CDH13P55290 713 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 POLR2LP62875 67 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ARHGEF7Q14155 803 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 OR4D1Q15615 310 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 PFKFB4Q16877 469 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 AARS2Q5JTZ9 985 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 KIAA0907Q7Z7F0 614 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 LCA5Q86VQ0 697 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CACUL1Q86Y37 369 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 YAF2Q8IY57 180 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CPNE9Q8IYJ1 553 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 SCAMP4Q969E2 229 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 KLHL29Q96CT2 875 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ZNF641Q96N77 438 aaPredicted RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TUBGCP5Q96RT8 1024 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CLPBQ9H078 707 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 COG4Q9H9E3 785 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 GDE1Q9NZC3 331 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TRMT6Q9UJA5 497 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 APPL1Q9UKG1 709 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 IKZF3Q9UKT9 509 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 SARDHQ9UL12 918 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 CDH7Q9ULB5 785 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 G3BP2Q9UN86 482 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 SLC12A4Q9UP95 1085 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 PRSS21Q9Y6M0 314 aa6.59□□□□□ -1.35
CCDC30-209ENST00000477155 ATXN2Q99700 1313 aaKnown RBP6.59□□□□□ -1.35
CCDC30-209ENST00000477155 TRIOBPQ9H2D6 2365 aa6.59□□□□□ -1.36
CCDC30-209ENST00000477155 PLK4O00444 970 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 PRMT5O14744 637 aaPredicted RBP6.58□□□□□ -1.36
CCDC30-209ENST00000477155 HOXC11O43248 304 aaPredicted RBP6.58□□□□□ -1.36
CCDC30-209ENST00000477155 MTX2O75431 263 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 IPO13O94829 963 aaKnown RBP6.58□□□□□ -1.36
CCDC30-209ENST00000477155 SIX3O95343 332 aaPredicted RBP6.58□□□□□ -1.36
CCDC30-209ENST00000477155 PYGLP06737 847 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 POU2F2P09086 479 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 SPAM1P38567 509 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 WASP42768 502 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 PTGER3P43115 390 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 NCALDP61601 193 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 TSNQ15631 228 aaKnown RBP6.58□□□□□ -1.36
CCDC30-209ENST00000477155 ATP13A5Q4VNC0 1218 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 ANKRD54Q6NXT1 300 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 PARM1Q6UWI2 310 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 Q6ZVL8 140 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 SNX20Q7Z614 316 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 ETFBKMTQ8IXQ9 262 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 STK40Q8N2I9 435 aa6.58□□□□□ -1.36
CCDC30-209ENST00000477155 MAPK15Q8TD08 544 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms