RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 EXD1Q8NHP7 514 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 SYN2Q92777 582 aaPredicted RBP11.57□□□□□ -0.56
VARS2-208ENST00000477052 NKD1Q969G9 470 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 COX14Q96I36 57 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 TAAR9Q96RI9 348 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 SLC38A3Q99624 504 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 KCTD5Q9NXV2 234 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 SLC39A1Q9NY26 324 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 AKAP7Q9P0M2 348 aaPredicted RBP11.57□□□□□ -0.56
VARS2-208ENST00000477052 RCOR3Q9P2K3 495 aaPredicted RBP11.57□□□□□ -0.56
VARS2-208ENST00000477052 NENFQ9UMX5 172 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 LUC7L2Q9Y383 392 aaKnown RBP11.57□□□□□ -0.56
VARS2-208ENST00000477052 ZFC3H1O60293 1989 aaKnown RBP11.56□□□□□ -0.56
VARS2-208ENST00000477052 STMND1H3BQB6 276 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 THRAP10827 490 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 LIFP15018 202 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 ZNF30P17039 623 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 ITGB6P18564 788 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 CCNCP24863 283 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 CSTF2P33240 577 aaKnown RBP eCLIP11.56□□□□□ -0.56
VARS2-208ENST00000477052 GPR3P46089 330 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 SPINT3P49223 89 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 MESDQ14696 234 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 PLA2G4EQ3MJ16 856 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 TMEM164Q5U3C3 297 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 ALG1LQ6GMV1 187 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 TIGD7Q6NT04 549 aaPredicted RBP11.56□□□□□ -0.56
VARS2-208ENST00000477052 ZNF765Q7L2R6 523 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 LYSMD3Q7Z3D4 306 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 UNC5BQ8IZJ1 945 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 NDUFAF2Q8N183 169 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 SFRP1Q8N474 314 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 AGBL5Q8NDL9 886 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 OR4D9Q8NGE8 314 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 NCSTNQ92542 709 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 EID2BQ96D98 161 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 AHCYL2Q96HN2 611 aaKnown RBP11.56□□□□□ -0.56
VARS2-208ENST00000477052 TSGA13Q96PP4 275 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 ZNF670Q9BS34 389 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 TBC1D10AQ9BXI6 508 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 FAM117AQ9C073 453 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 APMAPQ9HDC9 416 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 PRDM8Q9NQV8 689 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 SHOC2Q9UQ13 582 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 HEY1Q9Y5J3 304 aa11.56□□□□□ -0.56
VARS2-208ENST00000477052 MYO18BQ8IUG5 2567 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 LRRD1A4D1F6 860 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 HGSO14964 777 aaPredicted RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 MTX2O75431 263 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 TNNT1P13805 278 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 KDELR1P24390 212 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 UGT1A3P35503 534 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 TPM4P67936 248 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 HHEXQ03014 270 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 PCSK7Q16549 785 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 HENMT1Q5T8I9 393 aaKnown RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 TMEM71Q6P5X7 295 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 CRTC3Q6UUV7 619 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 LRRC49Q8IUZ0 686 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 CCDC13Q8IYE1 715 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 ZSCAN1Q8NBB4 408 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 FAF2Q96CS3 445 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 MLPHQ9BV36 600 aaPredicted RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 SLC12A9Q9BXP2 914 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 XPO4Q9C0E2 1151 aaKnown RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 OR2AG1Q9H205 316 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 FAM83DQ9H4H8 585 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 SCHIP1Q9P0W5 487 aaPredicted RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 ATXN10Q9UBB4 475 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 HYOU1Q9Y4L1 999 aa11.55□□□□□ -0.56
VARS2-208ENST00000477052 HEMK1Q9Y5R4 338 aaPredicted RBP11.55□□□□□ -0.56
VARS2-208ENST00000477052 F5H423 210 aaPredicted RBP11.54□□□□□ -0.56
VARS2-208ENST00000477052 GOLGA6L19H0YKK7 550 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 DUX1O43812 170 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 ZNF8P17098 575 aaPredicted RBP11.54□□□□□ -0.56
VARS2-208ENST00000477052 NOP2P46087 812 aaKnown RBP11.54□□□□□ -0.56
VARS2-208ENST00000477052 DYNLT1P63172 113 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 AP1B1Q10567 949 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
VARS2-208ENST00000477052 PDK2Q15119 407 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 COLEC12Q5KU26 742 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 IYDQ6PHW0 289 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 PTRH1Q86Y79 214 aaKnown RBP11.54□□□□□ -0.56
VARS2-208ENST00000477052 CACNA2D3Q8IZS8 1091 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 PLD5Q8N7P1 536 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 BMPERQ8N8U9 685 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 GPR26Q8NDV2 337 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 OR10G6Q8NH81 332 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 SPATA22Q8NHS9 363 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 CTNNBL1Q8WYA6 563 aaPredicted RBP11.54□□□□□ -0.56
VARS2-208ENST00000477052 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 RNF157Q96PX1 679 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 SPATA16Q9BXB7 569 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 OSGEPL1Q9H4B0 414 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 SPTLC3Q9NUV7 552 aa11.54□□□□□ -0.56
VARS2-208ENST00000477052 SLC23A2Q9UGH3 650 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms