RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 HERPUD2Q9BSE4 406 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 NLRC4Q9NPP4 1024 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 CASS4Q9NQ75 786 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 RCOR3Q9P2K3 495 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 CNOT8Q9UFF9 292 aaKnown RBP16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 KCNK6Q9Y257 313 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 PPIL1Q9Y3C6 166 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 PCDHGA6Q9Y5G7 932 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
APOBEC3F-203ENST00000476513 EPHB6O15197 1021 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 SNX2O60749 519 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 NDUFA10O95299 355 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 RECKO95980 971 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 PEX11BO96011 259 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 C9P02748 559 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 DCTP40126 519 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 SH3BP2P78314 561 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 DNASE1L3Q13609 305 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 LRRC66Q68CR7 880 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 ZNF765Q7L2R6 523 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 MAMDC2Q7Z304 686 aaPredicted RBP16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 NLRP8Q86W28 1048 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 PIH1D2Q8WWB5 315 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 ELMO2Q96JJ3 720 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 SMIM14Q96QK8 99 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 OR6C1Q96RD1 312 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 MGME1Q9BQP7 344 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 SNRNP25Q9BV90 132 aaKnown RBP16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 OGFRQ9NZT2 677 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 CPNE7Q9UBL6 633 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 DOPEY1Q5JWR5 2465 aa16.28■□□□□ 0.2
APOBEC3F-203ENST00000476513 CENPEQ02224 2701 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 ABCA12Q86UK0 2595 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 KIR2DS5A0A0G2JLQ3 304 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 A0A0G2JNG1 304 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 LILRA5A6NI73 299 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 KIR2DS3K7RE56 304 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 SORBS2O94875 1100 aaKnown RBP16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 ATP1A1P05023 1023 aaKnown RBP16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 PYGLP06737 847 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 ACP5P13686 325 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 F3P13726 295 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 SLC2A4P14672 509 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 SEPHS1P49903 392 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 PGDP52209 483 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 PTSQ03393 145 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 IL11RAQ14626 422 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 KIR2DS5Q14953 304 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 EIF2S3LQ2VIR3 472 aaKnown RBP16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 ERMARDQ5T6L9 678 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 ARMC12Q5T9G4 340 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 DCUN1D2Q6PH85 259 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 RASGRP3Q8IV61 690 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 EXD1Q8NHP7 514 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 PEBP4Q96S96 227 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 RIOK2Q9BVS4 552 aaKnown RBP16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 FAM207AQ9NSI2 230 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 SAMSN1Q9NSI8 373 aaKnown RBP16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 VPS18Q9P253 973 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 LNPEPQ9UIQ6 1025 aa16.27■□□□□ 0.2
APOBEC3F-203ENST00000476513 SHANK1Q9Y566 2161 aa16.27■□□□□ 0.19
APOBEC3F-203ENST00000476513 ANKRD17O75179 2603 aaKnown RBP16.27■□□□□ 0.19
APOBEC3F-203ENST00000476513 GOLGA6L3A6NEY3 463 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 TCP11X1B4DZS4 312 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 SPAG6O75602 509 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 CLDN1O95832 211 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 PDHA1P08559 390 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 CCNYL3P0C7X3 344 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 TYRP1P17643 537 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 DESP17661 470 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 CASP14P31944 242 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 GARSP41250 739 aaKnown RBP16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 MAXP61244 160 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 MRPL49Q13405 166 aaKnown RBP16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 INPP5JQ15735 1006 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 PPP6R3Q5H9R7 873 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 ARFGAP1Q8N6T3 406 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 CT55Q8WUE5 264 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 MLXIPLQ9NP71 852 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 SEPT11Q9NVA2 429 aaKnown RBP16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 PCSK1NQ9UHG2 260 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 PADI1Q9ULC6 663 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 CNOT6Q9ULM6 557 aaKnown RBP16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 HIVEP3Q5T1R4 2406 aa16.26■□□□□ 0.19
APOBEC3F-203ENST00000476513 OR5K4A6NMS3 321 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 TOX3O15405 576 aaPredicted RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 FGF5P12034 268 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 LEPRP48357 1165 aaKnown RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 HCAR3P49019 387 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 UBE2IP63279 158 aaKnown RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 DPYSQ14117 519 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 PRR30Q53SZ7 412 aaPredicted RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 TCP11X2Q5H9J9 407 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 RALGPS1Q5JS13 557 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 CPZQ66K79 652 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 TGM7Q96PF1 710 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 PLEKHG4BQ96PX9 1271 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms