RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 CHD9Q3L8U1 2897 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 PIK3R1P27986 724 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 PPARGP37231 505 aaPredicted RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 CTSOP43234 321 aaPredicted RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 GLRBP48167 497 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 PFKPQ01813 784 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 CUL3Q13618 768 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 GSTA3Q16772 222 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 TYSND1Q2T9J0 566 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 DGKKQ5KSL6 1271 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 HECTD2Q5U5R9 776 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 FAM45BPQ6NSW5 357 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 KLC3Q6P597 504 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 LDB1Q86U70 411 aaPredicted RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 DEFB107AQ8IZN7 70 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 C12orf76Q8N812 135 aaPredicted RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 KDM1BQ8NB78 822 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 FAM45AQ8TCE6 357 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 HEXDCQ8WVB3 486 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 PIH1D2Q8WWB5 315 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 RPL10LQ96L21 214 aaKnown RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 LENG8Q96PV6 779 aaPredicted RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 SMIM14Q96QK8 99 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 NDNQ99608 321 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 PBX4Q9BYU1 374 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 CEP44Q9C0F1 390 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 INTS10Q9NVR2 710 aaKnown RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 VWA7Q9Y334 891 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 STX7O15400 261 aaKnown RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 STC1P52823 247 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 XIAPP98170 497 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 TBL3Q12788 808 aaKnown RBP18.99■□□□□ 0.63
SYF2-204ENST00000476231 ACAP2Q15057 778 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 TECRLQ5HYJ1 363 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 TMC5Q6UXY8 1006 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 OR6K2Q8NGY2 324 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 TCF12Q99081 682 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 SERPINI1Q99574 410 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 TNKS2Q9H2K2 1166 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 ZNF711Q9Y462 761 aa18.99■□□□□ 0.63
SYF2-204ENST00000476231 H7C0S8 307 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 LTA4HP09960 611 aaKnown RBP18.98■□□□□ 0.63
SYF2-204ENST00000476231 PMLP29590 882 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 SERPINA4P29622 427 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 STK19P49842 368 aaPredicted RBP18.98■□□□□ 0.63
SYF2-204ENST00000476231 ECT2LQ008S8 904 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 SEMA3AQ14563 771 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 ZNF460Q14592 562 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 C22orf39Q6P5X5 142 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 KIAA0907Q7Z7F0 614 aaPredicted RBP18.98■□□□□ 0.63
SYF2-204ENST00000476231 SLC22A9Q8IVM8 553 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 AFAP1L2Q8N4X5 818 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 PCDH20Q8N6Y1 951 aaKnown RBP18.98■□□□□ 0.63
SYF2-204ENST00000476231 UBXN10Q96LJ8 280 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 TUBGCP5Q96RT8 1024 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 OLFM1Q99784 485 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 C19orf43Q9BQ61 176 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 OSBPL1AQ9BXW6 950 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 NKX2-4Q9H2Z4 354 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 VCX3BQ9H321 246 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 EML4Q9HC35 981 aaKnown RBP18.98■□□□□ 0.63
SYF2-204ENST00000476231 POLR3BQ9NW08 1133 aaPredicted RBP18.98■□□□□ 0.63
SYF2-204ENST00000476231 MSRAQ9UJ68 235 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 POMPQ9Y244 141 aa18.98■□□□□ 0.63
SYF2-204ENST00000476231 LOC100653049A0A140TA62 436 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 KRT34O76011 436 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 WISP3O95389 354 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 SLC4A1P02730 911 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 PGGT1BP53609 377 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 KCNC3Q14003 757 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 PPP2R2DQ66LE6 453 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 RYBPQ8N488 228 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 CDCA3Q99618 268 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 WDR55Q9H6Y2 383 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 DZANK1Q9NVP4 752 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 MYO7AQ13402 2215 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 HMGCLP35914 325 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 CYLC2Q14093 348 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 CCNIQ14094 377 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 RAB30Q15771 203 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 MYLK3Q32MK0 819 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 TRIM67Q6ZTA4 783 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 AHI1Q8N157 1196 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 KYQ8NBH2 561 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 TXNDC5Q8NBS9 432 aaKnown RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 NR1H4Q96RI1 486 aaPredicted RBP18.97■□□□□ 0.63
SYF2-204ENST00000476231 TRMOQ9BU70 441 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 NUF2Q9BZD4 464 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 GPR63Q9BZJ6 419 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 BCAP29Q9UHQ4 241 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 VPS9D1Q9Y2B5 631 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 CRYL1Q9Y2S2 319 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 PKP3Q9Y446 797 aa18.97■□□□□ 0.63
SYF2-204ENST00000476231 A0A0J9YYE9 177 aa18.96■□□□□ 0.63
SYF2-204ENST00000476231 PFDN6O15212 129 aa18.96■□□□□ 0.63
SYF2-204ENST00000476231 KIF1CO43896 1103 aaKnown RBP18.96■□□□□ 0.63
SYF2-204ENST00000476231 IPO13O94829 963 aaKnown RBP18.96■□□□□ 0.63
SYF2-204ENST00000476231 TRBC1P01850 177 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms