RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SEMA4BQ9NPR2 832 aaPredicted RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 SPATS2LQ9NUQ6 558 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 PDP2Q9P2J9 529 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 RNF112Q9ULX5 631 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 MYOCOSA0A1B0GUC4 107 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 SUPT3HB4E1H0 165 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 SUPT3HO75486 399 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 PGM3O95394 542 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 GKP32189 559 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 CSKP41240 450 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 GRIA2P42262 883 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 AGTR2P50052 363 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 INHBCP55103 352 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 VEPH1Q14D04 833 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 SPATA24Q86W54 205 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 APCDD1Q8J025 514 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 CLYBLQ8N0X4 340 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 AFAP1L2Q8N4X5 818 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 RHEBL1Q8TAI7 183 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 TOP1MTQ969P6 601 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 KIAA1191Q96A73 305 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 TRMT2BQ96GJ1 504 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 TFB2MQ9H5Q4 396 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 RETREG1Q9H6L5 497 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 LHX3Q9UBR4 397 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 VPS51Q9UID3 782 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 OGDHLQ9ULD0 1010 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 STX7O15400 261 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 EEF1DP29692 281 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 PDK3Q15120 406 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 LILRA2Q8N149 483 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 STAG3L4Q8TBR4 150 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 EEF1AKMT1Q8WVE0 214 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 FUBP1Q96AE4 644 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 TUBB1Q9H4B7 451 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 POPDC3Q9HBV1 291 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 TSR3Q9UJK0 312 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 CLEC4EQ9ULY5 219 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 PCDHGA7Q9Y5G6 932 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 ANKRD12Q6UB98 2062 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 C9JVG2 144 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 BTN3A1O00481 513 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 SMAD6O43541 496 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 ECI2O75521 394 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 PRDX3P30048 256 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 RHOAP61586 193 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 TLR1Q15399 786 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 CTSL3PQ5NE16 218 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 TAS2R42Q7RTR8 314 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 CAMK1DQ8IU85 385 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 HERC6Q8IVU3 1022 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 SLC39A11Q8N1S5 342 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 DCUN1D1Q96GG9 259 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 SLC45A3Q96JT2 553 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 LRGUKQ96M69 825 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 SYTL2Q9HCH5 934 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 SARS2Q9NP81 518 aaKnown RBP16.54■□□□□ 0.24
TVP23B-202ENST00000476139 OR51B4Q9Y5P0 310 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 CPQQ9Y646 472 aa16.54■□□□□ 0.24
TVP23B-202ENST00000476139 NPEPPSL1A6NEC2 478 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 E7ENX8 843 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 NRG2O14511 850 aaPredicted RBP16.53■□□□□ 0.24
TVP23B-202ENST00000476139 LINC00032P0C843 101 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 CHRM3P20309 590 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
TVP23B-202ENST00000476139 RALGDSQ12967 914 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 KLHL32Q96NJ5 620 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 SLC39A3Q9BRY0 314 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 DERL2Q9GZP9 239 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 PSMD13Q9UNM6 376 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 BTRCQ9Y297 605 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 TIMM22Q9Y584 194 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 LCHNA4D1U4 455 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 PIP5K1BO14986 540 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 FESP07332 822 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 CCL5P13501 91 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 HOXB8P17481 243 aaPredicted RBP16.53■□□□□ 0.24
TVP23B-202ENST00000476139 CA8P35219 290 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 CLCQ05315 142 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 RAD51Q06609 339 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 CDH18Q13634 790 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 RAB33AQ14088 237 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 LRP8Q14114 963 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 PTK2BQ14289 1009 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 GRB7Q14451 532 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 SQLEQ14534 574 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 DDIASQ8IXT1 998 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 FBXO39Q8N4B4 442 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
TVP23B-202ENST00000476139 SEMA6AQ9H2E6 1030 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 CACNA2D2Q9NY47 1150 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 GMPR2Q9P2T1 348 aaKnown RBP16.53■□□□□ 0.24
TVP23B-202ENST00000476139 STOML2Q9UJZ1 356 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 ATP11BQ9Y2G3 1177 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 ASB1Q9Y576 335 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 INSL5Q9Y5Q6 135 aa16.53■□□□□ 0.24
TVP23B-202ENST00000476139 TEX28O15482 410 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms