RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 C1QBP02746 253 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 COL6A1P12109 1028 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PRKAR2AP13861 404 aaKnown RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 ITGA2P17301 1181 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 DDX5P17844 614 aaKnown RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 MPSTP25325 297 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PTBP1P26599 531 aaKnown RBP eCLIP4.09□□□□□ -1.76
USP16-205ENST00000474835 ELK4P28324 431 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 IL12AP29459 219 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 BTCP35070 178 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 NR2C2P49116 596 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 TMED10P49755 219 aaKnown RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 GZMKP49863 264 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ARSFP54793 590 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 IRF9Q00978 393 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ZNF33AQ06730 810 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SCAPQ12770 1279 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 COL19A1Q14993 1142 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 GPR162Q16538 588 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ARHGAP44Q17R89 818 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ESCO1Q5FWF5 840 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PRSS36Q5K4E3 855 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SPANXN3Q5MJ09 141 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PPP1R26Q5T8A7 1209 aaPredicted RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 STYK1Q6J9G0 422 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 C16orf87Q6PH81 154 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 HHIPL2Q6UWX4 724 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 DNM1P46Q6ZS02 220 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SLC46A3Q7Z3Q1 461 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 R3HCC1LQ7Z5L2 792 aaKnown RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 SLC22A16Q86VW1 577 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ADGRG3Q86Y34 549 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PLCZ1Q86YW0 608 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ELMOD2Q8IZ81 293 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SVOPQ8N4V2 548 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PARP16Q8N5Y8 322 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 TTLQ8NG68 377 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 ASB15Q8WXK1 588 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PPWD1Q96BP3 646 aaKnown RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 RMDN1Q96DB5 314 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PGBD4Q96DM1 585 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SORCS2Q96PQ0 1159 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 LXNQ9BS40 222 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 HEMGNQ9BXL5 484 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SRRQ9GZT4 340 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SEMA6AQ9H2E6 1030 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 DIABLOQ9NR28 239 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 CYP26B1Q9NR63 512 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 IL37Q9NZH6 218 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 LRP2BPQ9P2M1 347 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 SAE1Q9UBE0 346 aaPredicted RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 HMGXB4Q9UGU5 601 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 VPS4AQ9UN37 437 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 NUP205Q92621 2012 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 A0A1B0GTQ1 180 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 KHNYNO15037 678 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 ARPC2O15144 300 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZMPSTE24O75844 475 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 INMTO95050 263 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ENO2P09104 434 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 KRT5P13647 590 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GGT1P19440 569 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 HIBADHP31937 336 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 ETFBP38117 255 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 RPS9P46781 194 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 NPTX2P47972 431 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CLK3P49761 638 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 DCDP81605 110 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 MVKQ03426 396 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CDK5R2Q13319 367 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MAPRE2Q15555 327 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MEP1AQ16819 746 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 LRRC36Q1X8D7 754 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CEP55Q53EZ4 464 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MDH1BQ5I0G3 518 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GPR158Q5T848 1215 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZNF425Q6IV72 752 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 FSTL4Q6MZW2 842 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ZNF551Q7Z340 670 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 CMIPQ8IY22 773 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CARNMT1Q8N4J0 409 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TP53I13Q8NBR0 393 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 SMG8Q8ND04 991 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 LPAR1Q92633 364 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ABTB1Q969K4 478 aaPredicted RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 VOPP1Q96AW1 172 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 CHFRQ96EP1 664 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TRMT61AQ96FX7 289 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 C3orf30Q96M34 536 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MUS81Q96NY9 551 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 DEPDC7Q96QD5 511 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 ALG13Q9NP73 1137 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 SLC17A6Q9P2U8 582 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 FAM198AQ9UFP1 575 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SIX4Q9UIU6 781 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 OAZ3Q9UMX2 235 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MED16Q9Y2X0 877 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 KLK4Q9Y5K2 254 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 GOLGA8QA0A0J9YX86 632 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TESPA1A2RU30 521 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms