RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PYGMP11217 842 aa15.05■□□□□ -0
VARS-223ENST00000474643 HGFP14210 728 aa15.05■□□□□ -0
VARS-223ENST00000474643 CCKBRP32239 447 aa15.05■□□□□ -0
VARS-223ENST00000474643 ACTR1BP42025 376 aa15.05■□□□□ -0
VARS-223ENST00000474643 ACTR1AP61163 376 aa15.05■□□□□ -0
VARS-223ENST00000474643 ZBTB17Q13105 803 aa15.05■□□□□ -0
VARS-223ENST00000474643 HLTFQ14527 1009 aaKnown RBP eCLIP15.05■□□□□ -0
VARS-223ENST00000474643 SEL1L2Q5TEA6 688 aa15.05■□□□□ -0
VARS-223ENST00000474643 TMEM164Q5U3C3 297 aa15.05■□□□□ -0
VARS-223ENST00000474643 AADACL2Q6P093 401 aa15.05■□□□□ -0
VARS-223ENST00000474643 GALNT13Q8IUC8 556 aa15.05■□□□□ -0
VARS-223ENST00000474643 PELI3Q8N2H9 469 aa15.05■□□□□ -0
VARS-223ENST00000474643 LPCAT1Q8NF37 534 aa15.05■□□□□ -0
VARS-223ENST00000474643 CCHCR1Q8TD31 782 aa15.05■□□□□ -0
VARS-223ENST00000474643 TMEM159Q96B96 161 aa15.05■□□□□ -0
VARS-223ENST00000474643 NSMCE3Q96MG7 304 aa15.05■□□□□ -0
VARS-223ENST00000474643 OR2M4Q96R27 311 aa15.05■□□□□ -0
VARS-223ENST00000474643 MCCC1Q96RQ3 725 aaPredicted RBP15.05■□□□□ -0
VARS-223ENST00000474643 TAAR2Q9P1P5 351 aa15.05■□□□□ -0
VARS-223ENST00000474643 CHKBQ9Y259 395 aa15.05■□□□□ -0
VARS-223ENST00000474643 EFR3BQ9Y2G0 817 aa15.05■□□□□ -0
VARS-223ENST00000474643 PCDHB11Q9Y5F2 797 aa15.05■□□□□ -0
VARS-223ENST00000474643 RP1P56715 2156 aa15.04■□□□□ -0
VARS-223ENST00000474643 LRP4O75096 1905 aa15.04■□□□□ -0
VARS-223ENST00000474643 A0A0J9YYE9 177 aa15.04■□□□□ -0
VARS-223ENST00000474643 A0A1W2PQM1 296 aa15.04■□□□□ -0
VARS-223ENST00000474643 PMS2P1A4D2B8 440 aa15.04■□□□□ -0
VARS-223ENST00000474643 CDRT15L2A8MXV6 281 aa15.04■□□□□ -0
VARS-223ENST00000474643 HACD1B0YJ81 288 aa15.04■□□□□ -0
VARS-223ENST00000474643 CASC3O15234 703 aaKnown RBP15.04■□□□□ -0
VARS-223ENST00000474643 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
VARS-223ENST00000474643 NOBOXO60393 691 aa15.04■□□□□ -0
VARS-223ENST00000474643 TRBC1P01850 177 aa15.04■□□□□ -0
VARS-223ENST00000474643 PRB1P04280 392 aa15.04■□□□□ -0
VARS-223ENST00000474643 PDHA1P08559 390 aa15.04■□□□□ -0
VARS-223ENST00000474643 GM2AP17900 193 aa15.04■□□□□ -0
VARS-223ENST00000474643 AK4P27144 223 aaPredicted RBP15.04■□□□□ -0
VARS-223ENST00000474643 SLC5A2P31639 672 aa15.04■□□□□ -0
VARS-223ENST00000474643 PTPN7P35236 360 aa15.04■□□□□ -0
VARS-223ENST00000474643 CD86P42081 329 aa15.04■□□□□ -0
VARS-223ENST00000474643 TNNT3P45378 269 aaPredicted RBP15.04■□□□□ -0
VARS-223ENST00000474643 POLD2P49005 469 aa15.04■□□□□ -0
VARS-223ENST00000474643 PDX1P52945 283 aa15.04■□□□□ -0
VARS-223ENST00000474643 MAPK10P53779 464 aa15.04■□□□□ -0
VARS-223ENST00000474643 MAZP56270 477 aaKnown RBP15.04■□□□□ -0
VARS-223ENST00000474643 PRKD1Q15139 912 aaPredicted RBP15.04■□□□□ -0
VARS-223ENST00000474643 OGFOD3Q6PK18 319 aa15.04■□□□□ -0
VARS-223ENST00000474643 ADAMTSL4Q6UY14 1074 aa15.04■□□□□ -0
VARS-223ENST00000474643 LSM14AQ8ND56 463 aaKnown RBP15.04■□□□□ -0
VARS-223ENST00000474643 PRR11Q96HE9 360 aaPredicted RBP15.04■□□□□ -0
VARS-223ENST00000474643 HES6Q96HZ4 224 aa15.04■□□□□ -0
VARS-223ENST00000474643 ADGRE3Q9BY15 652 aa15.04■□□□□ -0
VARS-223ENST00000474643 FRMD8Q9BZ67 464 aaPredicted RBP15.04■□□□□ -0
VARS-223ENST00000474643 STN1Q9H668 368 aaKnown RBP15.04■□□□□ -0
VARS-223ENST00000474643 PCDH9Q9HC56 1237 aa15.04■□□□□ -0
VARS-223ENST00000474643 SPATS2LQ9NUQ6 558 aaKnown RBP15.04■□□□□ -0
VARS-223ENST00000474643 PKD2L2Q9NZM6 624 aa15.04■□□□□ -0
VARS-223ENST00000474643 KLHL8Q9P2G9 620 aaPredicted RBP15.04■□□□□ -0
VARS-223ENST00000474643 BPTFQ12830 3046 aa15.04■□□□□ -0
VARS-223ENST00000474643 C1orf232A0A0U1RR37 186 aa15.03■□□□□ -0
VARS-223ENST00000474643 A0A1W2PNU3 283 aaPredicted RBP15.03■□□□□ -0
VARS-223ENST00000474643 CAPN8A6NHC0 703 aa15.03■□□□□ -0
VARS-223ENST00000474643 INPP4BO15327 924 aa15.03■□□□□ -0
VARS-223ENST00000474643 STK10O94804 968 aaKnown RBP15.03■□□□□ -0
VARS-223ENST00000474643 ECEL1O95672 775 aa15.03■□□□□ -0
VARS-223ENST00000474643 CPNE6O95741 557 aa15.03■□□□□ -0
VARS-223ENST00000474643 SLC4A1P02730 911 aa15.03■□□□□ -0
VARS-223ENST00000474643 CEACAM5P06731 702 aa15.03■□□□□ -0
VARS-223ENST00000474643 IVLP07476 585 aa15.03■□□□□ -0
VARS-223ENST00000474643 TEAD1P28347 426 aa15.03■□□□□ -0
VARS-223ENST00000474643 ADCY8P40145 1251 aa15.03■□□□□ -0
VARS-223ENST00000474643 EIF3EP60228 445 aaKnown RBP15.03■□□□□ -0
VARS-223ENST00000474643 CTBSQ01459 385 aa15.03■□□□□ -0
VARS-223ENST00000474643 OTUD4Q01804 1114 aaKnown RBP15.03■□□□□ -0
VARS-223ENST00000474643 DPTQ07507 201 aa15.03■□□□□ -0
VARS-223ENST00000474643 NIPAL4Q0D2K0 466 aa15.03■□□□□ -0
VARS-223ENST00000474643 XRCC4Q13426 336 aa15.03■□□□□ -0
VARS-223ENST00000474643 NOMO1Q15155 1222 aa15.03■□□□□ -0
VARS-223ENST00000474643 PTPRRQ15256 657 aa15.03■□□□□ -0
VARS-223ENST00000474643 RPS6KA1Q15418 735 aa15.03■□□□□ -0
VARS-223ENST00000474643 TEX44Q53QW1 395 aa15.03■□□□□ -0
VARS-223ENST00000474643 FAM182AQ5T1J6 154 aa15.03■□□□□ -0
VARS-223ENST00000474643 DARS2Q6PI48 645 aaKnown RBP15.03■□□□□ -0
VARS-223ENST00000474643 PID1Q7Z2X4 250 aa15.03■□□□□ -0
VARS-223ENST00000474643 CLEC14AQ86T13 490 aa15.03■□□□□ -0
VARS-223ENST00000474643 TRIM74Q86UV6 250 aa15.03■□□□□ -0
VARS-223ENST00000474643 CDKL3Q8IVW4 592 aaPredicted RBP15.03■□□□□ -0
VARS-223ENST00000474643 REXO1L1PQ8IX06 675 aa15.03■□□□□ -0
VARS-223ENST00000474643 NRSN1Q8IZ57 195 aa15.03■□□□□ -0
VARS-223ENST00000474643 TTC13Q8NBP0 860 aa15.03■□□□□ -0
VARS-223ENST00000474643 TRIM58Q8NG06 486 aa15.03■□□□□ -0
VARS-223ENST00000474643 ACTL9Q8TC94 416 aa15.03■□□□□ -0
VARS-223ENST00000474643 GPBAR1Q8TDU6 330 aa15.03■□□□□ -0
VARS-223ENST00000474643 PIH1D2Q8WWB5 315 aa15.03■□□□□ -0
VARS-223ENST00000474643 HTR3CQ8WXA8 447 aa15.03■□□□□ -0
VARS-223ENST00000474643 AHCYL2Q96HN2 611 aaKnown RBP15.03■□□□□ -0
VARS-223ENST00000474643 QKIQ96PU8 341 aaKnown RBP eCLIP15.03■□□□□ -0
VARS-223ENST00000474643 CCNL2Q96S94 520 aaPredicted RBP15.03■□□□□ -0
VARS-223ENST00000474643 TDRD1Q9BXT4 1180 aaKnown RBP15.03■□□□□ -0
VARS-223ENST00000474643 ABCG8Q9H221 673 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms