RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 A0A0U1RQS6 177 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PABPN1LA6NDY0 278 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 AREL1O15033 823 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PLRG1O43660 514 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 UGT1A9O60656 530 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 RNGTTO60942 597 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 NDUFS2O75306 463 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM155BO75949 473 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 RECQL5O94762 991 aaPredicted RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 RHOBTB1O94844 696 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 MPOP05164 745 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 NEFHP12036 1026 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 BRAFP15056 766 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 GABRG2P18507 467 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 KRT4P19013 534 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 ACRV1P26436 265 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 ARNTP27540 789 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CRABP2P29373 138 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 FOXN2P32314 431 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 DRD3P35462 400 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 RPS9P46781 194 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 LEPRP48357 1165 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CCT5P48643 541 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CCR3P51677 355 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 METAP1P53582 386 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 ZXDAP98168 799 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 POU4F1Q01851 419 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 SIGLEC14Q08ET2 396 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 RALGDSQ12967 914 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 ITIH4Q14624 930 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 TYSND1Q2T9J0 566 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 LDLRAP1Q5SW96 308 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 NEK5Q6P3R8 708 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 KLC3Q6P597 504 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 Q6ZVL8 140 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CYP2U1Q7Z449 544 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CCDC91Q7Z6B0 441 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D1Q86TI0 1168 aaPredicted RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 TAX1BP1Q86VP1 789 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 ZC3HC1Q86WB0 502 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 SERPINA9Q86WD7 417 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 SPEM1Q8N4L4 309 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CCDC63Q8NA47 563 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 GPR26Q8NDV2 337 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 ACMSDQ8TDX5 336 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 DYDC1Q8WWB3 177 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 HHIPQ96QV1 700 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PANX3Q96QZ0 392 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 RIOK2Q9BVS4 552 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 SLC6A17Q9H1V8 727 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 VPS11Q9H270 941 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CNOT10Q9H9A5 744 aaKnown RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 UGT1A7Q9HAW7 530 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 UGT1A10Q9HAW8 530 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 UGT1A8Q9HAW9 530 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PLAC1Q9HBJ0 212 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 IL26Q9NPH9 171 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PCMTD2Q9NV79 361 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 TAS2R13Q9NYV9 303 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 OGFRQ9NZT2 677 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 NFKBIL1Q9UBC1 381 aaPredicted RBP10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 CRYL1Q9Y2S2 319 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 COQ6Q9Y2Z9 468 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 PSAT1Q9Y617 370 aa10.21□□□□□ -0.77
PRPF38A-202ENST00000474048 C5orf42Q9H799 3197 aa10.21□□□□□ -0.78
PRPF38A-202ENST00000474048 SZT2Q5T011 3432 aa10.21□□□□□ -0.78
PRPF38A-202ENST00000474048 A0A1W2PQU0 124 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ANTXRLA6NF34 631 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PRMT5O14744 637 aaPredicted RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 TPP1O14773 563 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PLXNA2O75051 1894 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 HAUS5O94927 633 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 SLC25A14O95258 325 aaPredicted RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 SYF2O95926 243 aaKnown RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 AHSGP02765 367 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ESR1P03372 595 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PCCBP05166 539 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 OR56A5P0C7T3 313 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 F5P12259 2224 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 CHRM3P20309 590 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PSMA3P25788 255 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 GCAP28676 217 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 FMO4P31512 558 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 NSG1P42857 185 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ABCG1P45844 678 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ADPRHP54922 357 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PPP2R2AP63151 447 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 XIAPP98170 497 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PEX6Q13608 980 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 LRRC14Q15048 493 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 CDKN3Q16667 212 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 TTMPQ5BVD1 217 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 PSAPL1Q6NUJ1 521 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 TMEM92Q6UXU6 159 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 LDB1Q86U70 411 aaPredicted RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 TRABD2AQ86V40 505 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 HORMAD1Q86X24 394 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 SLC41A1Q8IVJ1 513 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms