RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CAMK2DQ13557 499 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 IL11RAQ14626 422 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 TRIP6Q15654 476 aaKnown RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 DUSP6Q16828 381 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 CCDC142Q17RM4 750 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 C2orf68Q2NKX9 166 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 CBWD6Q4V339 395 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 CBWD3Q5JTY5 395 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 DCST1Q5T197 706 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 OTUD1Q5VV17 481 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 SLC18B1Q6NT16 456 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 KCTD18Q6PI47 426 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ZNF66Q6ZN08 573 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 SLC16A12Q6ZSM3 486 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 INTS8Q75QN2 995 aaKnown RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 MTSS1LQ765P7 747 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 SHFQ7M4L6 423 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 RD3Q7Z3Z2 195 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 CAMKMTQ7Z624 323 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 SDCCAG8Q86SQ7 713 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 IQCHQ86VS3 1027 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 IQCA1Q86XH1 822 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 XXYLT1Q8NBI6 393 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 OR10S1Q8NGN2 331 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 AFAP1L1Q8TED9 768 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 PIGOQ8TEQ8 1089 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ADAMTS14Q8WXS8 1223 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ERGIC1Q969X5 290 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ERLEC1Q96DZ1 483 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 EGFL8Q99944 293 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 FERMT1Q9BQL6 677 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 KRCC1Q9NPI7 259 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ACSS1Q9NUB1 689 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-212ENST00000473961 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 TMEM184CQ9NVA4 438 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 MTMR10Q9NXD2 777 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 OR6C3Q9NZP0 311 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 C5AR2Q9P296 337 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 IL36RNQ9UBH0 155 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 HACL1Q9UJ83 578 aa4.26□□□□□ -1.73
BRCA1-212ENST00000473961 EDDM13A0A1B0GTR0 161 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 A0A1W2PR77 199 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 ARHGEF37A1IGU5 675 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 E5RJQ4 531 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 H0Y626 953 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 VWA5AO00534 786 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 HS3ST1O14792 307 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PSMD10O75832 226 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 RSL1D1O76021 490 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 RECQL5O94762 991 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 BAG2O95816 211 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 TRUB2O95900 331 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 SYF2O95926 243 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 FTCDO95954 541 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MUTP22033 750 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 TCEA1P23193 301 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 EEF1B2P24534 225 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PTAFRP25105 342 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MPGP29372 298 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 STX2P32856 288 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 FASLGP48023 281 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 ZNF75DP51815 510 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 SCN1BQ07699 218 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 RALGDSQ12967 914 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MMEL1Q495T6 779 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 CCDC184Q52MB2 194 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MANEAQ5SRI9 462 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 DCAF12L2Q5VW00 463 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 FRG2Q64ET8 278 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 KRT39Q6A163 491 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 RBPMS2Q6ZRY4 209 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 DENND5BQ6ZUT9 1274 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MFN1Q8IWA4 741 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 AFAP1Q8N556 730 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 ARRDC2Q8TBH0 407 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MAGEC3Q8TD91 643 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 SECISBP2LQ93073 1101 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PKNOX2Q96KN3 472 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 LRFN5Q96NI6 719 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 CDRT15Q96T59 188 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 KXD1Q9BQD3 176 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 MSTO1Q9BUK6 570 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 NUP85Q9BW27 656 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PRSS22Q9GZN4 317 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 SLCO5A1Q9H2Y9 848 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PIGMQ9H3S5 423 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 KCNK15Q9H427 330 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PAG1Q9NWQ8 432 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 WDR35Q9P2L0 1181 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 TSPYL4Q9UJ04 414 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 ACSL5Q9ULC5 683 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 PCDHA12Q9UN75 941 aa4.25□□□□□ -1.73
BRCA1-212ENST00000473961 WBP11Q9Y2W2 641 aaKnown RBP4.25□□□□□ -1.73
BRCA1-212ENST00000473961 A0A0G2JK05 382 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 ASAP2O43150 1006 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 SPINT2O43291 252 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 STX6O43752 255 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 TSPAN1O60635 241 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms