RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DCAF6Q58WW2 860 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 PCID2Q5JVF3 399 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 CC2D1BQ5T0F9 858 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 RARS2Q5T160 578 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 METRNLQ641Q3 311 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 FAM90A2PQ658T7 463 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 KAZNQ674X7 775 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 GPR139Q6DWJ6 353 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 GRHL2Q6ISB3 625 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ACSM6Q6P461 480 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MTHFD1LQ6UB35 978 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 PTCHD4Q6ZW05 846 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 H1FNTQ75WM6 255 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 ARMCX2Q7L311 632 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 CACNA2D4Q7Z3S7 1137 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MAVSQ7Z434 540 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 GALNT5Q7Z7M9 940 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 WDR5BQ86VZ2 330 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 LCORLQ8N3X6 602 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 C12orf76Q8N812 135 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 PNPLA1Q8N8W4 532 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 BOLLQ8N9W6 283 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 SPATA20Q8TB22 786 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MYCBPAPQ8TBZ2 947 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SLC2A12Q8TD20 617 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ACER1Q8TDN7 264 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SSH3Q8TE77 659 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 CLEC4CQ8WTT0 213 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SCFD2Q8WU76 684 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 LPIN2Q92539 896 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 NPIPB3Q92617 1050 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 AKAP1Q92667 903 aaKnown RBP eCLIP2.44□□□□□ -2.02
CALD1-216ENST00000473714 NACC2Q96BF6 587 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 KLHL29Q96CT2 875 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 RSPRY1Q96DX4 576 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 RNFT2Q96EX2 444 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 FEM1CQ96JP0 617 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 NCAPGQ9BPX3 1015 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SLF1Q9BQI6 1058 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 PAAF1Q9BRP4 392 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MTG1Q9BT17 334 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 ABHD14AQ9BUJ0 271 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 NPLQ9BXD5 320 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 CDCP1Q9H5V8 836 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 TTC12Q9H892 705 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 SFXN1Q9H9B4 322 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SAP30LQ9HAJ7 183 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 IL21RQ9HBE5 538 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 KLC4Q9NSK0 619 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 TCP11L1Q9NUJ3 509 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 ARL8BQ9NVJ2 186 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 BEX4Q9NWD9 120 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 BABAM1Q9NWV8 329 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 HCFC1R1Q9NWW0 138 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 KCND2Q9NZV8 630 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 HCN3Q9P1Z3 774 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 EPS15L1Q9UBC2 864 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 KLQ9UEF7 1012 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 SARDHQ9UL12 918 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 CORO1CQ9ULV4 474 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 SLC8A2Q9UPR5 921 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 NAALADL1Q9UQQ1 740 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 OSGIN2Q9Y236 505 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 MAGED1Q9Y5V3 778 aaPredicted RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 COPG1Q9Y678 874 aaKnown RBP2.44□□□□□ -2.02
CALD1-216ENST00000473714 CRYBG3Q68DQ2 2970 aa2.44□□□□□ -2.02
CALD1-216ENST00000473714 HIVEP1P15822 2718 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SDK2Q58EX2 2172 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LAMA4Q16363 1823 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 FOCADQ5VW36 1801 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LCTP09848 1927 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LOC105369274A0A096LPK9 316 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LOC102723532A0A0G2JNH3 316 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 A0A1W2PRQ8 180 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 GAGE10A6NGK3 116 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 LRRC53A6NM62 1247 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 AHRRA9YTQ3 701 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 ANHXE9PGG2 379 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 SPRY2O43597 315 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CEP104O60308 925 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 EXOC3O60645 756 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 N4BP1O75113 896 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 TBCAO75347 108 aaKnown RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 PTP4A3O75365 173 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 GCATO75600 419 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 URI1O94763 535 aaPredicted RBP2.43□□□□□ -2.02
CALD1-216ENST00000473714 CAVIN2O95810 425 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 IL1AP01583 271 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 DNTTP04053 509 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CLEC3BP05452 202 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CYP3A4P08684 503 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CYP21A2P08686 494 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 EBLN1P0CF75 366 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CSH1P0DML2 217 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CSH2P0DML3 217 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CBSLP0DN79 551 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 CD72P21854 359 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 POU1F1P28069 291 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 HOXA6P31267 233 aa2.43□□□□□ -2.02
CALD1-216ENST00000473714 HOXC13P31276 330 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms