RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 UBE2CO00762 179 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 ADAMDEC1O15204 470 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 ZIC3O60481 467 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 STX2P32856 288 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 RPL3P39023 403 aaKnown RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 RFX5P48382 616 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 AMTP48728 403 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 PGGT1BP53609 377 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 FOXG1P55316 489 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 CSNK2A1P68400 391 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 DSC1Q08554 894 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 GPS2Q13227 327 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 GRAPQ13588 217 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 EFNB3Q15768 340 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 TMEM266Q2M3C6 531 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 TCP11X2Q5H9J9 407 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 LCN10Q6JVE6 187 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 C8orf82Q6P1X6 216 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 KCTD18Q6PI47 426 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 B3GNT6Q6ZMB0 384 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 ZNF517Q6ZMY9 492 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 CLEC17AQ6ZS10 378 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 ZC3HC1Q86WB0 502 aaKnown RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 SCYL3Q8IZE3 742 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 DSELQ8IZU8 1212 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 NRACQ8N912 160 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 MIGA1Q8NAN2 632 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 CSNK2A3Q8NEV1 391 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 PTPMT1Q8WUK0 201 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 ZNF622Q969S3 477 aaKnown RBP eCLIP4.67□□□□□ -1.66
BBX-223ENST00000473542 CEP295NLQ96MC4 621 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 GCNAQ96QF7 691 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 CNGB3Q9NQW8 809 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 HIF1ANQ9NWT6 349 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 TRMT1Q9NXH9 659 aaKnown RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 ELOVL5Q9NYP7 299 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 AGO1Q9UL18 857 aaKnown RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 TMEM184BQ9Y519 407 aaPredicted RBP4.67□□□□□ -1.66
BBX-223ENST00000473542 SQORQ9Y6N5 450 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 KAT6BQ8WYB5 2073 aa4.67□□□□□ -1.66
BBX-223ENST00000473542 LOC102723996A0A087X1L8 192 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 TCRBV21S2A2A0A5A6 115 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 TOMM40O96008 361 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 ICAM1P05362 532 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 PSG1P11464 419 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 MMP9P14780 707 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 CCKBRP32239 447 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 EIF2S3P41091 472 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 NR4A2P43354 598 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 MXI1P50539 228 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 ARSEP51690 589 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 PPATQ06203 517 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 Q0VFX4 171 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 AIMP1Q12904 312 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 TRAF2Q12933 501 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 CDC16Q13042 620 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 MAD2L1Q13257 205 aaPredicted RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 PRPF4BQ13523 1007 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 DECR1Q16698 335 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 KYNUQ16719 465 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 ODF3L2Q3SX64 289 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 DCST1Q5T197 706 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 SDCCAG8Q86SQ7 713 aaPredicted RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 POGLUT1Q8NBL1 392 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 KCTD6Q8NC69 237 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 MCUQ8NE86 351 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 APPL2Q8NEU8 664 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 OR1J2Q8NGS2 313 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 DUSP19Q8WTR2 217 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 APBB2Q92870 758 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 TAAR8Q969N4 342 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 TMCO6Q96DC7 493 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 HMCESQ96FZ2 354 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 APOL6Q9BWW8 343 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 DCLK3Q9C098 648 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 RBM38Q9H0Z9 239 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 RABEP2Q9H5N1 569 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 PAG1Q9NWQ8 432 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 STK39Q9UEW8 545 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 ZNF580Q9UK33 172 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 PLAGL1Q9UM63 463 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 PPIEQ9UNP9 301 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 WBP11Q9Y2W2 641 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 ZNF711Q9Y462 761 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 MAGED1Q9Y5V3 778 aaPredicted RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.66□□□□□ -1.66
BBX-223ENST00000473542 ZNF541Q9H0D2 1346 aa4.66□□□□□ -1.66
BBX-223ENST00000473542 A0A0U1RQJ8 604 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 H7C0S8 307 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 TNFRSF13BO14836 293 aaPredicted RBP4.65□□□□□ -1.67
BBX-223ENST00000473542 SPINT2O43291 252 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 GH2P01242 217 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 G6PDP11413 515 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 EEF1DP29692 281 aaKnown RBP4.65□□□□□ -1.67
BBX-223ENST00000473542 MSH2P43246 934 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 LIG4P49917 911 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 HNRNPH2P55795 449 aaKnown RBP4.65□□□□□ -1.67
BBX-223ENST00000473542 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
BBX-223ENST00000473542 FOXM1Q08050 763 aa4.65□□□□□ -1.67
BBX-223ENST00000473542 GRSF1Q12849 480 aaKnown RBP eCLIP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms