RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PRLP01236 227 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 CYP2A6P11509 494 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-209ENST00000473421 ACP5P13686 325 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 TYRP1P17643 537 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 LEPRP48357 1165 aaKnown RBP12.49□□□□□ -0.41
TRAF4-209ENST00000473421 SEPHS1P49903 392 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 RENBPP51606 427 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 FOXM1Q08050 763 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF235Q14590 738 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 SMTNL2Q2TAL5 461 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-209ENST00000473421 PLEKHA7Q6IQ23 1121 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 TCTN3Q6NUS6 607 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 GALNT13Q8IUC8 556 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 ULBP3Q9BZM4 244 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 SARS2Q9NP81 518 aaKnown RBP12.49□□□□□ -0.41
TRAF4-209ENST00000473421 FANCLQ9NW38 375 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
TRAF4-209ENST00000473421 RP1L1Q8IWN7 2480 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-209ENST00000473421 CREBBPQ92793 2442 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 CDC14CA4D256 554 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 KATNA1O75449 491 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 CLDN7O95471 211 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 ASMTLO95671 621 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 STC1P52823 247 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 NADK2Q4G0N4 442 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 CRTC2Q53ET0 693 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-209ENST00000473421 ARMC12Q5T9G4 340 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 CCDC13Q8IYE1 715 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 ESX1Q8N693 406 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF599Q96NL3 588 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 PLEKHG4BQ96PX9 1271 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 NT5MQ9NPB1 228 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 SLC23A2Q9UGH3 650 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 KCTD3Q9Y597 815 aa12.48□□□□□ -0.41
TRAF4-209ENST00000473421 MN1Q10571 1320 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 KIAA0754O94854 1291 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 AGFG2O95081 481 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 TRBC1P01850 177 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 C9P02748 559 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 MMP13P45452 471 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 HCAR3P49019 387 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 COPB1P53618 953 aaKnown RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 PPP1CAP62136 330 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 UBE2IP63279 158 aaKnown RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 DSC2Q02487 901 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 CHAF1BQ13112 559 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 SEPT6Q14141 434 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 CPZQ66K79 652 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 C6orf15Q6UXA7 325 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 USP45Q70EL2 814 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 APTXQ7Z2E3 356 aaKnown RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 ATCAYQ86WG3 371 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 EID2BQ96D98 161 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 C9orf72Q96LT7 481 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 TGM7Q96PF1 710 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 OR6C1Q96RD1 312 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 ZPBPQ9BS86 351 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 DONSONQ9NYP3 566 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 LUZP4Q9P127 313 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF624Q9P2J8 865 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 RCOR3Q9P2K3 495 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 CPNE7Q9UBL6 633 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 TEP1Q99973 2627 aaKnown RBP12.47□□□□□ -0.41
TRAF4-209ENST00000473421 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
TRAF4-209ENST00000473421 CENPEQ02224 2701 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 MKRN2OSH3BPM6 223 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 PRPSAP2O60256 369 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 F3P13726 295 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 SLC19A1P41440 591 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 PMS2P54278 862 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 RPS18P62269 152 aaKnown RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 MC1RQ01726 317 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 NIPAL4Q0D2K0 466 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 LRP8Q14114 963 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 MAP7Q14244 749 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 E4F1Q66K89 784 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 FAM199XQ6PEV8 388 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 ZNF765Q7L2R6 523 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 LYSMD3Q7Z3D4 306 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 TEX26Q8N6G2 289 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 NEK11Q8NG66 645 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 EXD1Q8NHP7 514 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 CT55Q8WUE5 264 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 HSPH1Q92598 858 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 EFHD1Q9BUP0 239 aa12.46□□□□□ -0.41
TRAF4-209ENST00000473421 TRIT1Q9H3H1 467 aaKnown RBP12.46□□□□□ -0.41
TRAF4-209ENST00000473421 PARVAQ9NVD7 372 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms