RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 EEF1GP26641 437 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 HTR7P34969 479 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 COPB1P53618 953 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 RPS18P62269 152 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 POLR2LP62875 67 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 UBE2IP63279 158 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 DSC2Q02487 901 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 NIPAL4Q0D2K0 466 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 KLRB1Q12918 225 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 CHAF1BQ13112 559 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 SMTNL2Q2TAL5 461 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 NADK2Q4G0N4 442 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 FAM69BQ5VUD6 431 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 TCTN3Q6NUS6 607 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 CERS6Q6ZMG9 384 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 CHST15Q7LFX5 561 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 POLNQ7Z5Q5 900 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 OR10G6Q8NH81 332 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 PLEKHG4BQ96PX9 1271 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 SARS2Q9NP81 518 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 FANCLQ9NW38 375 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF624Q9P2J8 865 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 A0A0J9YYE9 177 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 A1L4Q6 167 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 SNX2O60749 519 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CLDN1O95832 211 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 TRBC1P01850 177 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 C9P02748 559 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CD48P09326 243 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 ACP5P13686 325 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 BRAFP15056 766 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 TYRP1P17643 537 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 IL4RP24394 825 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 DLSTP36957 453 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 HCAR3P49019 387 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 BIRC2Q13490 618 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 KHDC1Q4VXA5 237 aaKnown RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CRTC2Q53ET0 693 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 DCUN1D2Q6PH85 259 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CEACAM20Q6UY09 585 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 ASB18Q6ZVZ8 466 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 KDELC2Q7Z4H8 507 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 TEX26Q8N6G2 289 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CCDC112Q8NEF3 446 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 ARRDC2Q8TBH0 407 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 ENOX1Q8TC92 643 aaKnown RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 RSC1A1Q92681 617 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 AHCYL2Q96HN2 611 aaKnown RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF599Q96NL3 588 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CSPG4P5Q96PW8 444 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 TEFMQ96QE5 360 aaKnown RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 NUP62CLQ9H1M0 184 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 LRRC4CQ9HCJ2 640 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 NT5MQ9NPB1 228 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 RCOR3Q9P2K3 495 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-223ENST00000473345 ZNHIT2Q9UHR6 403 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CHKBQ9Y259 395 aa9.51□□□□□ -0.89
MCF2L-223ENST00000473345 CDC14CA4D256 554 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 LGALS16A8MUM7 142 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 DDX3XO00571 662 aaKnown RBP eCLIP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 POLR1CO15160 346 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 DAPK3O43293 454 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 MFSD11O43934 449 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 KIAA0754O94854 1291 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 SORBS2O94875 1100 aaKnown RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ASMTLO95671 621 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ANKRD34CP0C6C1 535 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 RARAP10276 462 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 CYP2A6P11509 494 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF8P17098 575 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 CA5AP35218 305 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 SLC19A1P41440 591 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 MMP13P45452 471 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 SEPHS1P49903 392 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 RENBPP51606 427 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 PMS2P54278 862 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 MRPL49Q13405 166 aaKnown RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 IL10RAQ13651 578 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 MAP7Q14244 749 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF235Q14590 738 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 DPYSL2Q16555 572 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 HENMT1Q5T8I9 393 aaKnown RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ARMC12Q5T9G4 340 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 FAM199XQ6PEV8 388 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 ZNF765Q7L2R6 523 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 GALNT13Q8IUC8 556 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 CCDC13Q8IYE1 715 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 PAF1Q8N7H5 531 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 Q8NA96 180 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 CT55Q8WUE5 264 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 KIAA1143Q96AT1 154 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-223ENST00000473345 TCTN2Q96GX1 697 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
MCF2L-223ENST00000473345 C9orf72Q96LT7 481 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms