RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TCRBV7S3A2A0A539 114 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 PRSS38A1L453 326 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 SDC3O75056 442 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 SLC25A14O95258 325 aaPredicted RBP20.62■□□□□ 0.89
TOP3A-204ENST00000472959 IVLP07476 585 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 MLNP12872 115 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 CSRP1P21291 193 aaKnown RBP20.62■□□□□ 0.89
TOP3A-204ENST00000472959 ATP13A5Q4VNC0 1218 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 FAM151BQ6UXP7 276 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 RD3Q7Z3Z2 195 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 GATAD2AQ86YP4 633 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 PHYKPLQ8IUZ5 450 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 NAXDQ8IW45 347 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 PPIL6Q8IXY8 311 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 SDR16C5Q8N3Y7 309 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 SLC25A45Q8N413 288 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 FSTL5Q8N475 847 aaPredicted RBP20.62■□□□□ 0.89
TOP3A-204ENST00000472959 ZNF548Q8NEK5 533 aaPredicted RBP20.62■□□□□ 0.89
TOP3A-204ENST00000472959 OR13C4Q8NGS5 318 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 PEX13Q92968 403 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 SCARF2Q96GP6 870 aaPredicted RBP20.62■□□□□ 0.89
TOP3A-204ENST00000472959 SLC32A1Q9H598 525 aa20.62■□□□□ 0.89
TOP3A-204ENST00000472959 XAB2Q9HCS7 855 aaKnown RBP20.62■□□□□ 0.89
TOP3A-204ENST00000472959 CABIN1Q9Y6J0 2220 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 GPR89AB7ZAQ6 455 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TTI1O43156 1089 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 SH3BP5O60239 455 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 GPR89BP0CG08 455 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 CTSEP14091 401 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TERF1P54274 439 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 SESN2P58004 480 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 PUM1Q14671 1186 aaKnown RBP eCLIP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 ELOCQ15369 112 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 PRRT3Q5FWE3 981 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 PCID2Q5JVF3 399 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 ANKRD22Q5VYY1 191 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 ZNF534Q76KX8 674 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 MAATS1Q7Z4T9 603 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TRIM74Q86UV6 250 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 RBFAQ8N0V3 343 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 NAT8LQ8N9F0 302 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 PPHLN1Q8NEY8 458 aaKnown RBP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 ZNF398Q8TD17 642 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 SETD7Q8WTS6 366 aaKnown RBP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 PTCD2Q8WV60 388 aaKnown RBP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 PDXPQ96GD0 296 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 DNAJC1Q96KC8 554 aaKnown RBP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TCEAL2Q9H3H9 227 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-204ENST00000472959 RMI1Q9H9A7 625 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TRIM39Q9HCM9 518 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 CYP4F12Q9HCS2 524 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 SMOXQ9NWM0 555 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 FKBPLQ9UIM3 349 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 MOSPD1Q9UJG1 213 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TMEM98Q9Y2Y6 226 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 TCAF1Q9Y4C2 921 aa20.61■□□□□ 0.89
TOP3A-204ENST00000472959 H7C0S8 307 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 GAPDHSO14556 408 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 DNALI1O14645 258 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 SCAMP1O15126 338 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 AQP9O43315 295 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 SRP72O76094 671 aaKnown RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 PRAMEF1O95521 474 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 ASMTLO95671 621 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 POLD2P49005 469 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 TMPRSS15P98073 1019 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 XIAPP98170 497 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 CCDC38Q502W7 563 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 RNASEH2BQ5TBB1 312 aaKnown RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 DOK6Q6PKX4 331 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 HOOK3Q86VS8 718 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 LMX1AQ8TE12 382 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 RHBDD1Q8TEB9 315 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 LRRC61Q9BV99 259 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 CARS2Q9HA77 564 aaKnown RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 MRPL40Q9NQ50 206 aaKnown RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 UCKL1Q9NWZ5 548 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 TMPRSS11EQ9UL52 423 aa20.6■□□□□ 0.89
TOP3A-204ENST00000472959 OAS3Q9Y6K5 1087 aaKnown RBP20.6■□□□□ 0.89
TOP3A-204ENST00000472959 FAM187AA6NFU0 413 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 LMO7DNF2Z398 122 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 SMAPO00193 183 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 TPP1O14773 563 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 VEGFDO43915 354 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 UGT1A9O60656 530 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 TMEM63AO94886 807 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 ALPPL2P10696 532 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 UGT1A6P19224 532 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 ITGALP20701 1170 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 UGT1A1P22309 533 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 UGT1A4P22310 534 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 IVDP26440 423 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 UGT1A3P35503 534 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 UGT1A5P35504 534 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 C2orf54Q08AI8 447 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 NFATC2Q13469 925 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 GPR33Q49SQ1 333 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 LDLRAP1Q5SW96 308 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 TSTD2Q5T7W7 516 aa20.59■□□□□ 0.89
TOP3A-204ENST00000472959 KCTD16Q68DU8 428 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms