RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 FGF3P11487 239 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-210ENST00000472880 MPSTP25325 297 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 CD86P42081 329 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 ATP1A2P50993 1020 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 SQSTM1Q13501 440 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 SLC18A3Q16572 532 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 CHST15Q7LFX5 561 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-210ENST00000472880 ZNF761Q86XN6 746 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-210ENST00000472880 SFRP1Q8N474 314 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 OR10G6Q8NH81 332 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 EXTL1Q92935 676 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 PRKAB1Q9Y478 270 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 PCDHGA3Q9Y5H0 932 aa19.6■□□□□ 0.73
COL9A3-210ENST00000472880 OAS3Q9Y6K5 1087 aaKnown RBP19.6■□□□□ 0.73
COL9A3-210ENST00000472880 ZFC3H1O60293 1989 aaKnown RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 TRBV23OR9-2A0A075B6M9 112 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 KCNK1O00180 336 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 DNAJC6O75061 913 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 JCHAINP01591 159 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 HNRNPH3P31942 346 aaKnown RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 SPINT3P49223 89 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 HHEXQ03014 270 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 SLC10A2Q12908 348 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 QPCTQ16769 361 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 HENMT1Q5T8I9 393 aaKnown RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 XKR5Q6UX68 686 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 JPH3Q8WXH2 748 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 ART4Q93070 314 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 RNF157Q96PX1 679 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 MLPHQ9BV36 600 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-210ENST00000472880 ADGRE3Q9BY15 652 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 FAM83DQ9H4H8 585 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 TMEM9Q9P0T7 183 aa19.59■□□□□ 0.73
COL9A3-210ENST00000472880 LRRD1A4D1F6 860 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 FADS2P1A8MWK0 482 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 ANKRD66B4E2M5 251 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 SLC28A2O43868 658 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 MMP2P08253 660 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 TMEM253P0C7T8 217 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 ACP5P13686 325 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 SLC2A4P14672 509 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 KDELR1P24390 212 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 IFI35P80217 286 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-210ENST00000472880 PPIDQ08752 370 aaKnown RBP19.58■□□□□ 0.72
COL9A3-210ENST00000472880 GALNT3Q14435 633 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 MESDQ14696 234 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 LINC00303Q3SY05 128 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 TMEM71Q6P5X7 295 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 FAM129CQ86XR2 697 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 EXD3Q8N9H8 876 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 RAPGEF5Q92565 580 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 PMEPA1Q969W9 287 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 WDR24Q96S15 920 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 DDA1Q9BW61 102 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 XPO4Q9C0E2 1151 aaKnown RBP19.58■□□□□ 0.72
COL9A3-210ENST00000472880 RMI1Q9H9A7 625 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 SARS2Q9NP81 518 aaKnown RBP19.58■□□□□ 0.72
COL9A3-210ENST00000472880 KCNK6Q9Y257 313 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 HEY1Q9Y5J3 304 aa19.58■□□□□ 0.72
COL9A3-210ENST00000472880 PCYT1BQ9Y5K3 369 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-210ENST00000472880 RGSL1A5PLK6 1076 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 EML2O95834 649 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 NFATC3Q12968 1075 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 ZBTB17Q13105 803 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 TRIM14Q14142 442 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-210ENST00000472880 PRICKLE2Q7Z3G6 844 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 IL22RA1Q8N6P7 574 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 PLD5Q8N7P1 536 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 HERPUD2Q9BSE4 406 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 ASPSCR1Q9BZE9 553 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 FAM117AQ9C073 453 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 ZNHIT6Q9NWK9 470 aaKnown RBP19.57■□□□□ 0.72
COL9A3-210ENST00000472880 SLC39A1Q9NY26 324 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 TBC1D29Q9UFV1 150 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 CNOT6Q9ULM6 557 aaKnown RBP19.57■□□□□ 0.72
COL9A3-210ENST00000472880 HEMK1Q9Y5R4 338 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-210ENST00000472880 B3GALT1Q9Y5Z6 326 aa19.57■□□□□ 0.72
COL9A3-210ENST00000472880 SDK2Q58EX2 2172 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 EFCAB7A8K855 629 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 ZNF487B1APH4 448 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 APOL1O14791 398 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 AKR1B10O60218 316 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 SNX2O60749 519 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 WT1P19544 449 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-210ENST00000472880 RAB15P59190 212 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 AP1B1Q10567 949 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 NFATC2Q13469 925 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 ZNF569Q5MCW4 686 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 SNAP47Q5SQN1 464 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 LYSMD3Q7Z3D4 306 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 SLC9B2Q86UD5 537 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 PHYKPLQ8IUZ5 450 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 OR8K1Q8NGG5 319 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 NKD1Q969G9 470 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 SH3KBP1Q96B97 665 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 CEP41Q9BYV8 373 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 CARD9Q9H257 536 aa19.56■□□□□ 0.72
COL9A3-210ENST00000472880 SSU72P8A0A1W2PR75 194 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms