RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PCDHGA12O60330 932 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 SRP72O76094 671 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 RASGRP1O95267 797 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 PRAMEF1O95521 474 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 ITGALP20701 1170 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 MGAT1P26572 445 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 RPL21P46778 160 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 XIAPP98170 497 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 PPARDQ03181 441 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 EIF2B5Q13144 721 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 SUZ12Q15022 739 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 CHRNA6Q15825 494 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 DNAJC21Q5F1R6 531 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 DNTTIP2Q5QJE6 756 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 ENPP7Q6UWV6 458 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 FAM151BQ6UXP7 276 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 PHYKPLQ8IUZ5 450 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 PDIK1LQ8N165 341 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 SDR16C5Q8N3Y7 309 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 ULK4Q96C45 1275 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 DNAJC1Q96KC8 554 aaKnown RBP19.83■□□□□ 0.77
SF1-213ENST00000472725 NAT9Q9BTE0 207 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 LGR4Q9BXB1 951 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 TRIM39Q9HCM9 518 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 SAMD15Q9P1V8 674 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 KLQ9UEF7 1012 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 FKBPLQ9UIM3 349 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 SLC30A1Q9Y6M5 507 aa19.83■□□□□ 0.77
SF1-213ENST00000472725 USP34Q70CQ2 3546 aa19.83■□□□□ 0.76
SF1-213ENST00000472725 GAPDHSO14556 408 aaPredicted RBP19.82■□□□□ 0.76
SF1-213ENST00000472725 SLC25A14O95258 325 aaPredicted RBP19.82■□□□□ 0.76
SF1-213ENST00000472725 IVLP07476 585 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SDHBP21912 280 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 ITGA8P53708 1063 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 TERF1P54274 439 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SRP54P61011 504 aaKnown RBP19.82■□□□□ 0.76
SF1-213ENST00000472725 NFATC2Q13469 925 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 PTPRCAPQ14761 206 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 ATP13A5Q4VNC0 1218 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 CCDC38Q502W7 563 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 LDLRAP1Q5SW96 308 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 TPRG1LQ5T0D9 272 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SNX20Q7Z614 316 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 CCNJLQ8IV13 435 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 NETO1Q8TDF5 533 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 HEXDCQ8WVB3 486 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SEC14L1Q92503 715 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 LRRC39Q96DD0 335 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SCARF2Q96GP6 870 aaPredicted RBP19.82■□□□□ 0.76
SF1-213ENST00000472725 FAM129AQ9BZQ8 928 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 TRIM31Q9BZY9 425 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 ZCCHC2Q9C0B9 1178 aaKnown RBP19.82■□□□□ 0.76
SF1-213ENST00000472725 FSCN3Q9NQT6 498 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 TM7SF3Q9NS93 570 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 DNAJC28Q9NX36 388 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SYBUQ9NX95 663 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 SNX24Q9Y343 169 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 KNL1Q8NG31 2342 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 LRP4O75096 1905 aa19.82■□□□□ 0.76
SF1-213ENST00000472725 FAM237BA0A1B0GVD1 139 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 TMEM202A6NGA9 273 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 GOLGA8MH3BSY2 632 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 VEGFDO43915 354 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 TNFP01375 233 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 PAMP19021 973 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 HK3P52790 923 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 CACNG1Q06432 222 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 PEX6Q13608 980 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 KCTD19Q17RG1 926 aaPredicted RBP19.81■□□□□ 0.76
SF1-213ENST00000472725 KDM7AQ6ZMT4 941 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 ALYREFQ86V81 257 aaKnown RBP19.81■□□□□ 0.76
SF1-213ENST00000472725 PHACTR4Q8IZ21 702 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 DDHD1Q8NEL9 900 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 OR13J1Q8NGT2 312 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 LRRC1Q9BTT6 524 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 SLC13A1Q9BZW2 595 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 ASB8Q9H765 288 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 CHRAC1Q9NRG0 131 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 TREX1Q9NSU2 369 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 CSNK1G3Q9Y6M4 447 aa19.81■□□□□ 0.76
SF1-213ENST00000472725 TRBV5-4A0A0C4DH59 114 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 PRSS38A1L453 326 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 INPP4BO15327 924 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 TP73O15350 636 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 AVILO75366 819 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 CEACAM5P06731 702 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 JUNDP17535 347 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 EPHA8P29322 1005 aaPredicted RBP19.8■□□□□ 0.76
SF1-213ENST00000472725 MC4RP32245 332 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 ARL4CP56559 192 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 PRAMEP78395 509 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 TMPRSS15P98073 1019 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 HIF1AQ16665 826 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 ALG11Q2TAA5 492 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 INAVAQ3KP66 663 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 STPG1Q5TH74 334 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 AFTPHQ6ULP2 937 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 DBX2Q6ZNG2 339 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 TMEM135Q86UB9 458 aa19.8■□□□□ 0.76
SF1-213ENST00000472725 KIAA2013Q8IYS2 634 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms