RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 KIF1BPQ96EK5 621 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 ASCL2Q99929 193 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 TMEM47Q9BQJ4 181 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 SEBOXQ9HB31 216 aaPredicted RBP4.39□□□□□ -1.71
CD46-213ENST00000471987 ACSS1Q9NUB1 689 aaPredicted RBP4.39□□□□□ -1.71
CD46-213ENST00000471987 ACSL5Q9ULC5 683 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 PADI3Q9ULW8 664 aa4.39□□□□□ -1.71
CD46-213ENST00000471987 LRRC53A6NM62 1247 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 EIF3DO15371 548 aaKnown RBP eCLIP4.38□□□□□ -1.71
CD46-213ENST00000471987 NCAM2O15394 837 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 CTSVO60911 334 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 ARL1P40616 181 aaPredicted RBP4.38□□□□□ -1.71
CD46-213ENST00000471987 HALP42357 657 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 GNB1P62873 340 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 TLE2Q04725 743 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 DRAP1Q14919 205 aaPredicted RBP4.38□□□□□ -1.71
CD46-213ENST00000471987 GPR68Q15743 365 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 TAF12Q16514 161 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 RAD9BQ6WBX8 426 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 PLEKHM3Q6ZWE6 761 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 MAP7D3Q8IWC1 876 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 HCAR2Q8TDS4 363 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 APOPT1Q96IL0 206 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 LRR1Q96L50 414 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 VEZTQ9HBM0 779 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 OGFRQ9NZT2 677 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 KCND2Q9NZV8 630 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 TBX20Q9UMR3 447 aa4.38□□□□□ -1.71
CD46-213ENST00000471987 A0A0G2JLW4 131 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 HHLA1C9JL84 531 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 HS3ST1O14792 307 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 GGT5P36269 586 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 ARCN1P48444 511 aaKnown RBP4.37□□□□□ -1.71
CD46-213ENST00000471987 VAMP2P63027 116 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 FGFBP1Q14512 234 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 SLC1A5Q15758 541 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 GSTA3Q16772 222 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 COL28A1Q2UY09 1125 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 C18orf63Q68DL7 685 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 C15orf39Q6ZRI6 1047 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 NRROSQ86YC3 692 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 APLFQ8IW19 511 aaPredicted RBP4.37□□□□□ -1.71
CD46-213ENST00000471987 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 DNAAF4Q8WXU2 420 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 APBB2Q92870 758 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 ANKRD9Q96BM1 317 aaPredicted RBP4.37□□□□□ -1.71
CD46-213ENST00000471987 MAELQ96JY0 434 aaKnown RBP4.37□□□□□ -1.71
CD46-213ENST00000471987 PCGF1Q9BSM1 259 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 SLC52A3Q9NQ40 469 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 SLC6A13Q9NSD5 602 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 TCP11L1Q9NUJ3 509 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 MARCH4Q9P2E8 410 aaPredicted RBP4.37□□□□□ -1.71
CD46-213ENST00000471987 C2CD2Q9Y426 696 aa4.37□□□□□ -1.71
CD46-213ENST00000471987 LDLRAD4O15165 306 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 PIP5K1CO60331 668 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 PRSS56P0CW18 603 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 HSD3B1P14060 373 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 CSF2RAP15509 400 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 HOXC9P31274 260 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 CPOXP36551 454 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 UBA7P41226 1012 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 MLLT10P55197 1068 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 MAD2L1Q13257 205 aaPredicted RBP4.36□□□□□ -1.71
CD46-213ENST00000471987 TECRLQ5HYJ1 363 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 DPPA4Q7L190 304 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 TRPT1Q86TN4 253 aaKnown RBP4.36□□□□□ -1.71
CD46-213ENST00000471987 TRIM58Q8NG06 486 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 ARHGEF26Q96DR7 871 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 ZNF599Q96NL3 588 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 ACOX2Q99424 681 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 BRF2Q9HAW0 419 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 LTB4R2Q9NPC1 389 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 ASAH2Q9NR71 780 aa4.36□□□□□ -1.71
CD46-213ENST00000471987 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 A0A1W2PQM1 296 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 KCNN4O15554 427 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 CIDEAO60543 219 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 SEC31AO94979 1220 aaKnown RBP4.35□□□□□ -1.71
CD46-213ENST00000471987 IGLV1-44P01699 117 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 ERVK-10P10266 1014 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 HOXC8P31273 242 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 ABCD1P33897 745 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 CLDN20P56880 219 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 COG7P83436 770 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 RUNX1T1Q06455 604 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 GALNT2Q10471 571 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 ACVR2BQ13705 512 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 ALG11Q2TAA5 492 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 USP44Q9H0E7 712 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 LRMDAQ9H2I8 198 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 PRKRIP1Q9H875 184 aaPredicted RBP4.35□□□□□ -1.71
CD46-213ENST00000471987 HAO1Q9UJM8 370 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 SMAD5-AS1Q9Y6J3 95 aa4.35□□□□□ -1.71
CD46-213ENST00000471987 OR5K3A6NET4 321 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 NR5A2O00482 541 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 PSMD14O00487 310 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms