RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ZNF624Q9P2J8 865 aaPredicted RBP3.59□□□□□ -1.83
RBM39-228ENST00000471635 POLG2Q9UHN1 485 aa3.59□□□□□ -1.83
RBM39-228ENST00000471635 ZCWPW2A0A1B0GU75 182 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 TSPAN4O14817 238 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 EIF3DO15371 548 aaKnown RBP eCLIP3.58□□□□□ -1.84
RBM39-228ENST00000471635 EXTL3O43909 919 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 CIDEAO60543 219 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 HOXB5P09067 269 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 CDAP32320 146 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 COG7P83436 770 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 FGFBP1Q14512 234 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 DRAP1Q14919 205 aaPredicted RBP3.58□□□□□ -1.84
RBM39-228ENST00000471635 ALG11Q2TAA5 492 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 USP41Q3LFD5 358 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 C6orf141Q5SZD1 244 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 C15orf39Q6ZRI6 1047 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 MAP7D3Q8IWC1 876 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 ADSSL1Q8N142 457 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 SCRN2Q96FV2 425 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 MAELQ96JY0 434 aaKnown RBP3.58□□□□□ -1.84
RBM39-228ENST00000471635 HERPUD2Q9BSE4 406 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 VEZTQ9HBM0 779 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 SLC52A3Q9NQ40 469 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 PPP1R14DQ9NXH3 145 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 FBXL2Q9UKC9 423 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 UTYO14607 1347 aa3.58□□□□□ -1.84
RBM39-228ENST00000471635 TTC36A6NLP5 189 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 LRRC53A6NM62 1247 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 NCAM2O15394 837 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 PRKNO60260 465 aaPredicted RBP3.57□□□□□ -1.84
RBM39-228ENST00000471635 ZNF500O60304 480 aaPredicted RBP3.57□□□□□ -1.84
RBM39-228ENST00000471635 CTSVO60911 334 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 CAVIN2O95810 425 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 POLBP06746 335 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 FASLGP48023 281 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 CLDN20P56880 219 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 RUNX1T1Q06455 604 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 DCST1Q5T197 706 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 ZC2HC1BQ5TFG8 222 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 NAA35Q5VZE5 725 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 C18orf63Q68DL7 685 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 ZNF704Q6ZNC4 412 aaPredicted RBP3.57□□□□□ -1.84
RBM39-228ENST00000471635 NRROSQ86YC3 692 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 THAP6Q8TBB0 222 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 SLC44A1Q8WWI5 657 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 APBB2Q92870 758 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 TAAR8Q969N4 342 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 ANKRD9Q96BM1 317 aaPredicted RBP3.57□□□□□ -1.84
RBM39-228ENST00000471635 PCGF1Q9BSM1 259 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 PPCSQ9HAB8 311 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 KIF9Q9HAQ2 790 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 SLC28A3Q9HAS3 691 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 KCND2Q9NZV8 630 aa3.57□□□□□ -1.84
RBM39-228ENST00000471635 MARCH4Q9P2E8 410 aaPredicted RBP3.57□□□□□ -1.84
RBM39-228ENST00000471635 HHLA1C9JL84 531 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 HS3ST1O14792 307 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 KRT5P13647 590 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 AHRP35869 848 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 GNB1P62873 340 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 NEXNQ0ZGT2 675 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 DECR1Q16698 335 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 DPPA4Q7L190 304 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 CACNA2D4Q7Z3S7 1137 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 TRPT1Q86TN4 253 aaKnown RBP3.56□□□□□ -1.84
RBM39-228ENST00000471635 APLFQ8IW19 511 aaPredicted RBP3.56□□□□□ -1.84
RBM39-228ENST00000471635 ANKRD42Q8N9B4 389 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 LRR1Q96L50 414 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 NEUROD6Q96NK8 337 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 ZNF599Q96NL3 588 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 ACOX2Q99424 681 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 USP44Q9H0E7 712 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 LRMDAQ9H2I8 198 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 SARDHQ9UL12 918 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 TBX20Q9UMR3 447 aa3.56□□□□□ -1.84
RBM39-228ENST00000471635 PRSS56P0CW18 603 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 IL7RP16871 459 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 ABCD1P33897 745 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 APOBEC1P41238 236 aaKnown RBP3.55□□□□□ -1.84
RBM39-228ENST00000471635 PAFAH1B1P43034 410 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 ARCN1P48444 511 aaKnown RBP3.55□□□□□ -1.84
RBM39-228ENST00000471635 CTCFP49711 727 aaPredicted RBP3.55□□□□□ -1.84
RBM39-228ENST00000471635 TLE2Q04725 743 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 GRIK2Q13002 908 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 TRPC3Q13507 836 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 GSTA3Q16772 222 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 FAM69AQ5T7M9 428 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 PLEKHM3Q6ZWE6 761 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 FCAMRQ8WWV6 532 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 GCC1Q96CN9 775 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 HVCN1Q96D96 273 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 PPP1R13BQ96KQ4 1090 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 UBXN10Q96LJ8 280 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 SLC25A18Q9H1K4 315 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 BICC1Q9H694 974 aaKnown RBP3.55□□□□□ -1.84
RBM39-228ENST00000471635 TCP11L1Q9NUJ3 509 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 C2CD2Q9Y426 696 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 JRKLQ9Y4A0 524 aa3.55□□□□□ -1.84
RBM39-228ENST00000471635 A0A0G2JLW4 131 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms