RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PNCKQ6P2M8 343 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CNSTQ6PJW8 725 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 ADGRD1Q6QNK2 874 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 TMEM207Q6UWW9 146 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 FAM151BQ6UXP7 276 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 ADAMTSL4Q6UY14 1074 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CAPN12Q6ZSI9 719 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 NLRP9Q7RTR0 991 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 PTAR1Q7Z6K3 402 aaPredicted RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 GALNT7Q86SF2 657 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 ZC3HC1Q86WB0 502 aaKnown RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF547Q8IVP9 402 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SLC22A18ASQ8N1D0 253 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 TRAM1L1Q8N609 369 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CADM4Q8NFZ8 388 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 BTN2A2Q8WVV5 523 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 ISL2Q96A47 359 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 VPS35Q96QK1 796 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SRPK1Q96SB4 655 aaKnown RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SLC30A3Q99726 388 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 OMDQ99983 421 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 BTBD1Q9H0C5 482 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 FAM83DQ9H4H8 585 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 FZD3Q9NPG1 666 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SPATA6Q9NWH7 488 aaPredicted RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 VPS18Q9P253 973 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CTNNAL1Q9UBT7 734 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 MTRF1LQ9UGC7 380 aaKnown RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 FETUBQ9UGM5 382 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 FBXO5Q9UKT4 447 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 PLXNB3Q9ULL4 1909 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 GLYATL1P3A0A0U1RQE8 302 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 A0A1W2PPC4 97 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 PRR33A8MZF0 331 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 STK25O00506 426 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 STX7O15400 261 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 DNAJC6O75061 913 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF217O75362 1048 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 TM7SF2O76062 418 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ELFN1P0C7U0 828 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ACRV1P26436 265 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 MAT2AP31153 395 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 CTSCP53634 463 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 RPS21P63220 83 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 MGAT5Q09328 741 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 TCF15Q12870 199 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 GBX1Q14549 363 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF528Q3MIS6 628 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 RBM20Q5T481 1227 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 GPRC6AQ5T6X5 926 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ALS2CLQ60I27 953 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 KIAA1161Q6NSJ0 714 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 CCDC70Q6NSX1 233 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ERAP2Q6P179 960 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 PACS1Q6VY07 963 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 SNX20Q7Z614 316 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ADGRG6Q86SQ4 1221 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 TRIM74Q86UV6 250 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 KCNMB4Q86W47 210 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 LONP2Q86WA8 852 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 SPATS2Q86XZ4 545 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 TDRPQ86YL5 185 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 NXPE1Q8N323 547 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 DDHD1Q8NEL9 900 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 OR4L1Q8NH43 312 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 GIMAP7Q8NHV1 300 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF398Q8TD17 642 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ZBTB9Q96C00 473 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ZC3H10Q96K80 434 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 SH3GL2Q99962 352 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 GPR174Q9BXC1 333 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 TSPYL1Q9H0U9 437 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 IARS2Q9NSE4 1012 aaKnown RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 C20orf96Q9NUD7 363 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-207ENST00000471342 TMEM74BQ9NUR3 256 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 FAM53CQ9NYF3 392 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 KLF15Q9UIH9 416 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 CDYLQ9Y232 598 aa9.81□□□□□ -0.84
SF3A1-207ENST00000471342 ABCA7Q8IZY2 2146 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3DA0A087WVF3 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3IA0A087WXS9 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3EA0A087X179 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3KA0A087X1G2 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3FA6NER0 549 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TMEM202A6NGA9 273 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3LB9A6J9 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CHUKO15111 745 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CD3EAPO15446 510 aaKnown RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 MTX2O75431 263 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 RFPL1O75677 317 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PRAMEF1O95521 474 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 SYF2O95926 243 aaKnown RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 SLC4A1P02730 911 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CEACAM5P06731 702 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 HOXC4P09017 264 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3HP0C7X1 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CREB1P16220 341 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 MAOBP27338 520 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 OXTRP30559 389 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms