RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GPR26Q8NDV2 337 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 PIP4K2CQ8TBX8 421 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SREK1Q8WXA9 508 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 KCNJ9Q92806 393 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 MRPL57Q9BQC6 102 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 TSSK1BQ9BXA7 367 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 CDH19Q9H159 772 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 MRPL46Q9H2W6 279 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 FAM96AQ9H5X1 160 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 ASB8Q9H765 288 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SYTL2Q9HCH5 934 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SLCO1B3Q9NPD5 702 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 RAD18Q9NS91 495 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 TAS2R13Q9NYV9 303 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 XPR1Q9UBH6 696 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 CRLS1Q9UJA2 301 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 HCN2Q9UL51 889 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 FNDC3AQ9Y2H6 1198 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 MED16Q9Y2X0 877 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 OAS3Q9Y6K5 1087 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 PLXNB3Q9ULL4 1909 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 TCF20Q9UGU0 1960 aaKnown RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 CCDC189A1A4V9 331 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 A8MX80 341 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 C1QTNF3-AMACRE9PGA6 284 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 H0Y858 1186 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 H3BMM5 538 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 H3BQ06 376 aaPredicted RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 TK2O00142 265 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 EBAG9O00559 213 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 PRMT5O14744 637 aaPredicted RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 GPR39O43194 453 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 RHOBTB1O94844 696 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 TGDSO95455 350 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 PYGLP06737 847 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SBK3P0C264 359 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 CCDC166P0CW27 439 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 MYL2P10916 166 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 FGF3P11487 239 aaPredicted RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 ZNF7P17097 686 aaPredicted RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 ACRV1P26436 265 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 FMO4P31512 558 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 TNFRSF4P43489 277 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 GLRBP48167 497 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SOX9P48436 509 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 OCRLQ01968 901 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ELP6Q0PNE2 266 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 CSHL1Q14406 222 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ACAP2Q15057 778 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 CHRNA6Q15825 494 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 EGFLAMQ63HQ2 1017 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 TMEM207Q6UWW9 146 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ANKS4BQ8N8V4 417 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 OR6Y1Q8NGX8 325 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 PPP1R14CQ8TAE6 165 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ZNF398Q8TD17 642 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 HEXDCQ8WVB3 486 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 DNASE1L2Q92874 299 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ARRDC3Q96B67 414 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ULK4Q96C45 1275 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 NXNL1Q96CM4 212 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SCYL1Q96KG9 808 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 FAM129BQ96TA1 746 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 ELAC2Q9BQ52 826 aaKnown RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 PLCD4Q9BRC7 762 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SMOXQ9NWM0 555 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 OXSMQ9NWU1 459 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 KLHL14Q9P2G3 628 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SUN2Q9UH99 717 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 GNPTGQ9UJJ9 305 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SARDHQ9UL12 918 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 RUVBL2Q9Y230 463 aaKnown RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 STON1Q9Y6Q2 735 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 SZT2Q5T011 3432 aa9.32□□□□□ -0.92
VPS52-216ENST00000471309 PRRC2BQ5JSZ5 2229 aaKnown RBP9.32□□□□□ -0.92
VPS52-216ENST00000471309 ATXN2Q99700 1313 aaKnown RBP9.31□□□□□ -0.92
VPS52-216ENST00000471309 CKAP5Q14008 2032 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 IGLV3-16A0A075B6K0 115 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 TMEM114B3SHH9 223 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 C2CD4DB7Z1M9 353 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 SPECC1L-ADORA2AF8WAN1 911 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 AREL1O15033 823 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 SPINT1O43278 529 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 MBTPS2O43462 519 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 OR1I1O60431 355 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 DNAJC6O75061 913 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 NIPSNAP2O75323 286 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 EPHX1P07099 455 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 RBP1P09455 135 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ELFN1P0C7U0 828 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 TROVE2P10155 538 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS52-216ENST00000471309 RALBP11234 206 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 ADRB3P13945 408 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CD1DP15813 335 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 CTHP32929 405 aa9.31□□□□□ -0.92
VPS52-216ENST00000471309 SKIV2L2P42285 1042 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms