RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 PCDH9Q9HC56 1237 aa11.54□□□□□ -0.56
HLA-C-206ENST00000470363 ATP8A1Q9Y2Q0 1164 aa11.54□□□□□ -0.56
HLA-C-206ENST00000470363 UTP11Q9Y3A2 253 aaKnown RBP11.54□□□□□ -0.56
HLA-C-206ENST00000470363 OR1A2Q9Y585 309 aa11.54□□□□□ -0.56
HLA-C-206ENST00000470363 DGKBQ9Y6T7 804 aa11.54□□□□□ -0.56
HLA-C-206ENST00000470363 TTC24A2A3L6 582 aaPredicted RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 C5orf60A6NFR6 353 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 TMEM202A6NGA9 273 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 METTL18O95568 372 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 PRKCGP05129 697 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 ANXA6P08133 673 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 CR2P20023 1033 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 RPIAP49247 311 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 CARSP49589 748 aaKnown RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 BLKP51451 505 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 VSNL1P62760 191 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 TUBB4BP68371 445 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 IFI35P80217 286 aaPredicted RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 ELOCQ15369 112 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 P3H1Q32P28 736 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 TEX44Q53QW1 395 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 TIGD7Q6NT04 549 aaPredicted RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 ARHGEF18Q6ZSZ5 1173 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 CLEC14AQ86T13 490 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 LRRC49Q8IUZ0 686 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 HID1Q8IV36 788 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 PELI3Q8N2H9 469 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 CNTD1Q8N815 330 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 ARL10Q8N8L6 244 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 GPR156Q8NFN8 814 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 WDR48Q8TAF3 677 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 RTP4Q96DX8 246 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 NAF1Q96HR8 494 aaKnown RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 SPATA13Q96N96 652 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 PSKH2Q96QS6 385 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 CCDC3Q9BQI4 270 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 RAB17Q9H0T7 212 aa11.53□□□□□ -0.56
HLA-C-206ENST00000470363 RBM22Q9NW64 420 aaKnown RBP eCLIP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 KLHL8Q9P2G9 620 aaPredicted RBP11.53□□□□□ -0.56
HLA-C-206ENST00000470363 A0A1W2PQM1 296 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 HTRA2O43464 458 aaPredicted RBP11.52□□□□□ -0.57
HLA-C-206ENST00000470363 RECQL5O94762 991 aaPredicted RBP11.52□□□□□ -0.57
HLA-C-206ENST00000470363 RASGRP1O95267 797 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 FUCA1P04066 466 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 HLA-DQB2P05538 268 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 MYBL2P10244 700 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 NFKB1P19838 968 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 PSMB4P28070 264 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 CD68P34810 354 aaPredicted RBP11.52□□□□□ -0.57
HLA-C-206ENST00000470363 MAXP61244 160 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 CXADRP78310 365 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 MTM1Q13496 603 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 RFTN1Q14699 578 aaPredicted RBP11.52□□□□□ -0.57
HLA-C-206ENST00000470363 C3orf38Q5JPI3 329 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 MARC1Q5VT66 337 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 IZUMO3Q5VZ72 239 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 ESRP1Q6NXG1 681 aaKnown RBP11.52□□□□□ -0.57
HLA-C-206ENST00000470363 ERAP2Q6P179 960 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 ENPP7Q6UWV6 458 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 B3GNT8Q7Z7M8 397 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 IFT20Q8IY31 132 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 PGBD5Q8N414 524 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 ZNF843Q8N446 348 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 KYQ8NBH2 561 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 OR1E3Q8WZA6 343 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 MAML1Q92585 1016 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 GLMNQ92990 594 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 WBP1Q96G27 269 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 TEKT5Q96M29 485 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 FERMT1Q9BQL6 677 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 LGR4Q9BXB1 951 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 ATP13A3Q9H7F0 1226 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 ETNK1Q9HBU6 452 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 CPNE5Q9HCH3 593 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 NT5MQ9NPB1 228 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 THSD1Q9NS62 852 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 GRHL1Q9NZI5 618 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 PAK5Q9P286 719 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 TTLL3Q9Y4R7 772 aa11.52□□□□□ -0.57
HLA-C-206ENST00000470363 TCRBV7S3A2A0A539 114 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 DNALI1O14645 258 aaPredicted RBP11.51□□□□□ -0.57
HLA-C-206ENST00000470363 TNFRSF10CO14798 259 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 EFSO43281 561 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 MTSS1O43312 755 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 NOBOXO60393 691 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 STK10O94804 968 aaKnown RBP11.51□□□□□ -0.57
HLA-C-206ENST00000470363 ALPIP09923 528 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 XPAP23025 273 aaPredicted RBP11.51□□□□□ -0.57
HLA-C-206ENST00000470363 HTR1BP28222 390 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 SERPINA4P29622 427 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
HLA-C-206ENST00000470363 MMP13P45452 471 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 ITGA8P53708 1063 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 PLTPP55058 493 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 UCNP55089 124 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 KIAA1024LP59773 190 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 CCL7P80098 99 aa11.51□□□□□ -0.57
HLA-C-206ENST00000470363 BASP1P80723 227 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms