RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KCNA7Q96RP8 456 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 CAAP1Q9H8G2 361 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 AIG1Q9NVV5 245 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 TMEM45AQ9NWC5 275 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 SMOXQ9NWM0 555 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 IKZF3Q9UKT9 509 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 FRMPD3Q5JV73 1810 aa13.59□□□□□ -0.23
BRCA1-209ENST00000470026 A0A1W2PP18 115 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 TCRBV5S2A0A599 114 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 DYTNA2CJ06 578 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 ASPDHA6ND91 283 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 ARPC2O15144 300 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 IL10P22301 178 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 EEF1DP29692 281 aaKnown RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 ETFBP38117 255 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 HPCAP84074 193 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 CACNB2Q08289 660 aaPredicted RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 TRIM71Q2Q1W2 868 aaKnown RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 SLC36A3Q495N2 470 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 LRRC23Q53EV4 343 aaPredicted RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 ANKS6Q68DC2 871 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 RYBPQ8N488 228 aaPredicted RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 CBR4Q8N4T8 237 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 FAM47BQ8NA70 645 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 TRPV3Q8NET8 790 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 GAB3Q8WWW8 586 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 MGME1Q9BQP7 344 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 SYT17Q9BSW7 474 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 BRINP2Q9C0B6 783 aa13.58□□□□□ -0.23
BRCA1-209ENST00000470026 DDX18Q9NVP1 670 aaKnown RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 OAS3Q9Y6K5 1087 aaKnown RBP13.58□□□□□ -0.23
BRCA1-209ENST00000470026 TBX18O95935 607 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 LINC00032P0C843 101 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 GFAPP14136 432 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 CD9P21926 228 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 FASP25445 335 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 PSMA4P25789 261 aaKnown RBP13.58□□□□□ -0.24
BRCA1-209ENST00000470026 GALNT3Q14435 633 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 NADSYN1Q6IA69 706 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 DHRS4L2Q6PKH6 230 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 PAQR3Q6TCH7 311 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF280BQ86YH2 543 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 DDIASQ8IXT1 998 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 CMTR2Q8IYT2 770 aaKnown RBP13.58□□□□□ -0.24
BRCA1-209ENST00000470026 FBXO39Q8N4B4 442 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 FAM81AQ8TBF8 368 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 FUBP1Q96AE4 644 aaKnown RBP13.58□□□□□ -0.24
BRCA1-209ENST00000470026 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 C9orf16Q9BUW7 83 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 ADI1Q9BV57 179 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 IL1RL2Q9HB29 575 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 MARCH2Q9P0N8 246 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 PCDHB5Q9Y5E4 795 aa13.58□□□□□ -0.24
BRCA1-209ENST00000470026 TYW5A2RUC4 315 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 SAC3D1A6NKF1 404 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF701M0R085 212 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ECI2O75521 394 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 EEDO75530 441 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 RASAL1O95294 804 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CYBBP04839 570 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 SERPINF2P08697 491 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 FCGR1AP12314 374 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CHRM3P20309 590 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 HOXD9P28356 352 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 OXTRP30559 389 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 OR1E1P30953 314 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 GRK4P32298 578 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 EMP3P54852 163 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 DIO3P55073 304 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 MERTKQ12866 999 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 MTA1Q13330 715 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF235Q14590 738 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CIR1Q86X95 450 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 COLGALT2Q8IYK4 626 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 KLHDC9Q8NEP7 349 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 TAS2R13Q9NYV9 303 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 EGFL7Q9UHF1 273 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF225Q9UK10 706 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 GREB1Q4ZG55 1949 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 VWA8A3KMH1 1905 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 A0A087WXM4 84 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 SYCE1LA8MT33 242 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ADAMTS4O75173 837 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 RHOBTB1O94844 696 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CELF2O95319 508 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ESRRBO95718 433 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 UMPSP11172 480 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 GSK3BP49841 420 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 EEFSECP57772 596 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 MRPL58Q14197 206 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 PDCD4Q53EL6 469 aaKnown RBP13.57□□□□□ -0.24
BRCA1-209ENST00000470026 TXNDC11Q6PKC3 985 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 AFTPHQ6ULP2 937 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms