RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 DNAJC21Q5F1R6 531 aaKnown RBP14.69□□□□□ -0.06
COL9A3-209ENST00000469852 PLA2G2CQ5R387 149 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 ZNF648Q5T619 568 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-209ENST00000469852 ADAMTSL4Q6UY14 1074 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 MFSD2AQ8NA29 543 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 PTCD2Q8WV60 388 aaKnown RBP14.69□□□□□ -0.06
COL9A3-209ENST00000469852 ZNF669Q96BR6 464 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-209ENST00000469852 STAMBPL1Q96FJ0 436 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 EBNA1BP2Q99848 306 aaKnown RBP14.69□□□□□ -0.06
COL9A3-209ENST00000469852 TEX101Q9BY14 249 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 WDR26Q9H7D7 661 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 CAPN10Q9HC96 672 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 RAD18Q9NS91 495 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 KCTD5Q9NXV2 234 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 PCDHGA5Q9Y5G8 931 aa14.69□□□□□ -0.06
COL9A3-209ENST00000469852 OAS3Q9Y6K5 1087 aaKnown RBP14.69□□□□□ -0.06
COL9A3-209ENST00000469852 ZCWPW2A0A1B0GU75 182 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 FAM237BA0A1B0GVD1 139 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 TMEM202A6NGA9 273 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 NDC80O14777 642 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 VILLO15195 856 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 SRP72O76094 671 aaKnown RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 GOT2P00505 430 aaKnown RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 CFIP05156 583 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 MYBL2P10244 700 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 GNSP15586 552 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 TEAD1P28347 426 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 FOXN2P32314 431 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 HADHAP40939 763 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 ARCN1P48444 511 aaKnown RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 NXPH1P58417 271 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 CDK3Q00526 305 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 CAV1Q03135 178 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 CBLBQ13191 982 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 PDE1CQ14123 709 aaPredicted RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 DUOXA1Q1HG43 343 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 SKIDA1Q1XH10 827 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 KHDC1Q4VXA5 237 aaKnown RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 TRIM61Q5EBN2 209 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 UBAP2Q5T6F2 1119 aaKnown RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 PSAPL1Q6NUJ1 521 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 NLRP9Q7RTR0 991 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 ERMP1Q7Z2K6 904 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 TMEM135Q86UB9 458 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 CCDC25Q86WR0 208 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 GSPT2Q8IYD1 628 aaKnown RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 PIANPQ8IYJ0 282 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 UNC5BQ8IZJ1 945 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 DCLK2Q8N568 766 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 FBXO36Q8NEA4 188 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 NAT14Q8WUY8 206 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 KLHDC7BQ96G42 594 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 COX14Q96I36 57 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 C19orf43Q9BQ61 176 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 ZSCAN5AQ9BUG6 496 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 CDH19Q9H159 772 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 SAYSD1Q9NPB0 183 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 PARD6AQ9NPB6 346 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 SAMD15Q9P1V8 674 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 SUSD2Q9UGT4 822 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 NFU1Q9UMS0 254 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 ANKRD6Q9Y2G4 727 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 RPS6KL1Q9Y6S9 549 aa14.68□□□□□ -0.06
COL9A3-209ENST00000469852 EP300Q09472 2414 aaPredicted RBP14.68□□□□□ -0.06
COL9A3-209ENST00000469852 PRR5-ARHGAP8B1AHC4 643 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 GOLGA8KD6RF30 607 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 GOLGA8TH3BQL2 631 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 TLR4O00206 839 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 MTX2O75431 263 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 F7P08709 466 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-209ENST00000469852 MYCLP1P12525 358 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-209ENST00000469852 PGAM1P18669 254 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 HOXD12P35452 270 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 RABIFP47224 123 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 POLD2P49005 469 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 IRX4P78413 519 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 NFATC2Q13469 925 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 LAMB3Q13751 1172 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 FZD2Q14332 565 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL9A3-209ENST00000469852 SEMA3AQ14563 771 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 NAA30Q147X3 362 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-209ENST00000469852 CRYMQ14894 314 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 NFATC4Q14934 902 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 KIF19Q2TAC6 998 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 ZRANB3Q5FWF4 1079 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 PRAMEF14Q5SWL7 426 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 ZDHHC20Q5W0Z9 365 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 SLC23A3Q6PIS1 610 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 UNC5AQ6ZN44 842 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 CENPUQ71F23 418 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 IQCHQ86VS3 1027 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 IFT20Q8IY31 132 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 ZBED8Q8IZ13 594 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 OR2I1PQ8NGU4 316 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 ZNF398Q8TD17 642 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 DTX3LQ8TDB6 740 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 PEX13Q92968 403 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 GLYATL1Q969I3 302 aa14.67□□□□□ -0.06
COL9A3-209ENST00000469852 CFAP36Q96G28 342 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms