RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 THRAP10827 490 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 AQP4P55087 323 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 SH3BP2P78314 561 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 ZXDBP98169 803 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 BFSP2Q13515 415 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 ARMC12Q5T9G4 340 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 SCML4Q8N228 414 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 FBXW8Q8N3Y1 598 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 BHLHE22Q8NFJ8 381 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-203ENST00000469739 GDPD5Q8WTR4 605 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 DGCR14Q96DF8 476 aaKnown RBP9.39□□□□□ -0.91
TOP3A-203ENST00000469739 TRPM5Q9NZQ8 1165 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 NDUFA13Q9P0J0 144 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 CLEC4EQ9ULY5 219 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 TRAF6Q9Y4K3 522 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 V9GYQ6 96 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 UBDO15205 165 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 TPST1O60507 370 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 NELFEP18615 380 aaKnown RBP9.39□□□□□ -0.91
TOP3A-203ENST00000469739 ALDH1A3P47895 512 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 PIK3CGP48736 1102 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 GALK1P51570 392 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 YBX1P67809 324 aaKnown RBP9.39□□□□□ -0.91
TOP3A-203ENST00000469739 ZNF33AQ06730 810 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 CDC16Q13042 620 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 PARP15Q460N3 678 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 TRIM60Q495X7 471 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 MRNIPQ6NTE8 343 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 BEND5Q7L4P6 421 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 ARL10Q8N8L6 244 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 DIS3LQ8TF46 1054 aaKnown RBP9.39□□□□□ -0.91
TOP3A-203ENST00000469739 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 REV3LO60673 3130 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 IGLV3-10A0A075B6K4 115 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 SMAD6O43541 496 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 KATNA1O75449 491 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CKMP06732 381 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 NAT2P11245 290 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 ALOX15P16050 662 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MC4RP32245 332 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 GRIA2P42262 883 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MAGEA11P43364 429 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CLCN5P51795 746 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 DEFB103AP81534 67 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 FASTKQ14296 549 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CAPRIN1Q14444 709 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 TBCCQ15814 346 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 USP41Q3LFD5 358 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 FAM151BQ6UXP7 276 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 PIWIL4Q7Z3Z4 852 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CEP70Q8NHQ1 597 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 ACTRT2Q8TDY3 377 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 TUBGCP3Q96CW5 907 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 TMEM169Q96HH4 297 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 SIKE1Q9BRV8 207 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 C1orf50Q9BV19 199 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 OLA1Q9NTK5 396 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 POLR3BQ9NW08 1133 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 ZNF711Q9Y462 761 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 ASB1Q9Y576 335 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 A0A087X1B8 175 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 LOC285095A0A1B0GVY8 99 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MROH6A6NGR9 719 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 NR5A2O00482 541 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 STX7O15400 261 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MAGEB3O15480 346 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 SLC7A4O43246 635 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 C7P10643 843 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UGT1A6P19224 532 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UGT1A1P22309 533 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UGT1A4P22310 534 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UGT1A3P35503 534 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UGT1A5P35504 534 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 TRAF2Q12933 501 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 GRB7Q14451 532 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 UGT3A1Q6NUS8 523 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 B3GNT6Q6ZMB0 384 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 OTOP2Q7RTS6 562 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 DNAJB7Q7Z6W7 309 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 CPNE9Q8IYJ1 553 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 FAM110BQ8TC76 370 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 IER2Q9BTL4 223 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MFSD1Q9H3U5 465 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 MRGBPQ9NV56 204 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 DDX18Q9NVP1 670 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 EVLQ9UI08 416 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 E7ENX8 843 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 NRG2O14511 850 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 RPP40O75818 363 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 NDST3O95803 873 aa9.38□□□□□ -0.91
TOP3A-203ENST00000469739 HMGA1P17096 107 aaKnown RBP9.38□□□□□ -0.91
TOP3A-203ENST00000469739 EEF1DP29692 281 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms