RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 SMTNL2Q2TAL5 461 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 ANKRD20A8PQ5CZ79 823 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 CYB5D1Q6P9G0 228 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 ZNF571Q7Z3V5 609 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 ESX1Q8N693 406 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 SLC37A2Q8TED4 501 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 SCAMP4Q969E2 229 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 FATE1Q969F0 183 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 COX14Q96I36 57 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 RIOK2Q9BVS4 552 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 ADGRE3Q9BY15 652 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 FAM83DQ9H4H8 585 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 PKD2L2Q9NZM6 624 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 PLEKHM1Q9Y4G2 1056 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 ST14Q9Y5Y6 855 aa12.57□□□□□ -0.4
GAPVD1-214ENST00000469528 HECTD1Q9ULT8 2610 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 GPR89AB7ZAQ6 455 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 MYO1FO00160 1098 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.42e-8■■□□□ 14
GAPVD1-214ENST00000469528 INPP4BO15327 924 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 TOX3O15405 576 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 NKX2-8O15522 239 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 MAP3K6O95382 1288 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 SOD1P00441 154 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 GPR89BP0CG08 455 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 F3P13726 295 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 MX2P20592 715 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 IL1R2P27930 398 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 CSF2RBP32927 897 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 SSR1P43307 286 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 STC1P52823 247 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 NFATC2Q13469 925 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 APTXQ7Z2E3 356 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 PHYKPLQ8IUZ5 450 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 NIPA2Q8N8Q9 360 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 PTCD2Q8WV60 388 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 MLPHQ9BV36 600 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 SPRY4Q9C004 299 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 TRIM7Q9C029 511 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 PCDH18Q9HCL0 1135 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 RAD18Q9NS91 495 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 RBM22Q9NW64 420 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 19
GAPVD1-214ENST00000469528 TMEM9Q9P0T7 183 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 TMEM184BQ9Y519 407 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 KCTD3Q9Y597 815 aa12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 TLN1Q9Y490 2541 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 UBR5O95071 2799 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-214ENST00000469528 NAV2Q8IVL1 2488 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 SDK2Q58EX2 2172 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 GRID2O43424 1007 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 SNX2O60749 519 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 DNAJC6O75061 913 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 STK17BO94768 372 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CLDN7O95471 211 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CCNYL3P0C7X3 344 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 GARSP41250 739 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CLCNKAP51800 687 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 SRSF1Q07955 248 aaKnown RBP eCLIP12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CDC20Q12834 499 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 IL11RAQ14626 422 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 PDK2Q15119 407 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 LYSMD1Q96S90 227 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CTRCQ99895 268 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CARD9Q9H257 536 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 PCDH9Q9HC56 1237 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CPNE7Q9UBL6 633 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 TBC1D29Q9UFV1 150 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 KCND3Q9UK17 655 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 CHKBQ9Y259 395 aa12.55□□□□□ -0.4
GAPVD1-214ENST00000469528 C1orf232A0A0U1RR37 186 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 LOC101059948A0A1B0GTJ6 334 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 ANKRD66B4E2M5 251 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 RECKO95980 971 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 MT-ND3P03897 115 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 ANKRD34CP0C6C1 535 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 PRKAR1AP10644 381 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 AMD1P17707 334 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 XRCC1P18887 633 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 MAPK9P45984 424 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 SPINT3P49223 89 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 FOXK1P85037 733 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 FOXM1Q08050 763 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 GALNT2Q10471 571 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 KLRB1Q12918 225 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 PAFAH1B3Q15102 231 aaKnown RBP12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 PTPRRQ15256 657 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 SKIDA1Q1XH10 827 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 LACTB2Q53H82 288 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 ALG1LQ6GMV1 187 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 RFLNAQ6ZTI6 216 aa12.54□□□□□ -0.4
GAPVD1-214ENST00000469528 TRIM74Q86UV6 250 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms