RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 MGME1Q9BQP7 344 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 HERPUD2Q9BSE4 406 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 SNRNP25Q9BV90 132 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 TWSG1Q9GZX9 223 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 EPB41L1Q9H4G0 881 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 CUEDC1Q9NWM3 386 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 CNOT8Q9UFF9 292 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 PCSK1NQ9UHG2 260 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 DACH1Q9UI36 760 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 KCND3Q9UK17 655 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 KCNK6Q9Y257 313 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 PPIL1Q9Y3C6 166 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 OAS3Q9Y6K5 1087 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 ESPL1Q14674 2120 aa12.7□□□□□ -0.38
TRAPPC12-216ENST00000469400 PIPSLA2A3N6 862 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 SNX2O60749 519 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 KIAA0754O94854 1291 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 ATP1A1P05023 1023 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 PYGLP06737 847 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 PSMA2P25787 234 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 EEF1GP26641 437 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 GFERP55789 205 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 SH3BP2P78314 561 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 DPYSQ14117 519 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 SYCP1Q15431 976 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 PPP6R3Q5H9R7 873 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 ZNF765Q7L2R6 523 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 LYSMD3Q7Z3D4 306 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 APLFQ8IW19 511 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 ELMO2Q96JJ3 720 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 C9orf72Q96LT7 481 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 SMIM14Q96QK8 99 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 TRIM55Q9BYV6 548 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 CWC15Q9P013 229 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 CPNE7Q9UBL6 633 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 MAP4K5Q9Y4K4 846 aa12.69□□□□□ -0.38
TRAPPC12-216ENST00000469400 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 CREG1O75629 220 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 NDUFA10O95299 355 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 RECKO95980 971 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 C9P02748 559 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 PDHA1P08559 390 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 ACP5P13686 325 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 F3P13726 295 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 SLC2A4P14672 509 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 HCAR3P49019 387 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 SEPHS1P49903 392 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 MAMLD1Q13495 774 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 IL11RAQ14626 422 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 NADK2Q4G0N4 442 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 RALGPS1Q5JS13 557 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 ZNF787Q6DD87 383 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 CYP4V2Q6ZWL3 525 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 RASGRP3Q8IV61 690 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 MCOLN2Q8IZK6 566 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 AGPAT1Q99943 283 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 OGFRQ9NZT2 677 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 VPS18Q9P253 973 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 CNOT6Q9ULM6 557 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 PCDHGA6Q9Y5G7 932 aa12.68□□□□□ -0.38
TRAPPC12-216ENST00000469400 LILRA5A6NI73 299 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 OR5K4A6NMS3 321 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 FZD6O60353 706 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 MAFKO60675 156 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 ZNF30P17039 623 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 TYRP1P17643 537 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 COL8A1P27658 744 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 CASP14P31944 242 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 GARSP41250 739 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 STC1P52823 247 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 UBE2IP63279 158 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 DNASE1L3Q13609 305 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 NDUFAF2Q8N183 169 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 BBS5Q8N3I7 341 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 TGM7Q96PF1 710 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 ZNF768Q9H5H4 540 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 CASS4Q9NQ75 786 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 LNPEPQ9UIQ6 1025 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 SIK3Q9Y2K2 1263 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 DOPEY1Q5JWR5 2465 aa12.67□□□□□ -0.38
TRAPPC12-216ENST00000469400 HIVEP3Q5T1R4 2406 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 A0A0J9YYE9 177 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 GOLGA6L3A6NEY3 463 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 TOX3O15405 576 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 PRPSAP2O60256 369 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 SPAG6O75602 509 aa12.66□□□□□ -0.38
TRAPPC12-216ENST00000469400 SORBS2O94875 1100 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms