RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 RANBP9Q96S59 729 aa12.05□□□□□ -0.48
CTNS-205ENST00000467663 KLF6Q99612 283 aaPredicted RBP12.05□□□□□ -0.48
CTNS-205ENST00000467663 NINJ2Q9NZG7 142 aa12.05□□□□□ -0.48
CTNS-205ENST00000467663 HACD3Q9P035 362 aa12.05□□□□□ -0.48
CTNS-205ENST00000467663 DKK3Q9UBP4 350 aa12.05□□□□□ -0.48
CTNS-205ENST00000467663 ZC3H7BQ9UGR2 993 aaKnown RBP12.05□□□□□ -0.48
CTNS-205ENST00000467663 GGT7Q9UJ14 662 aa12.05□□□□□ -0.48
CTNS-205ENST00000467663 RIMKLBQ9ULI2 386 aa12.05□□□□□ -0.48
CTNS-205ENST00000467663 FRYQ5TBA9 3013 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 FAM237BA0A1B0GVD1 139 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 IGLON5A6NGN9 336 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 PMPCBO75439 489 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 USP1O94782 785 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 MT-CYBP00156 380 aaPredicted RBP12.04□□□□□ -0.48
CTNS-205ENST00000467663 CDK4P11802 303 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 ADRA1DP25100 572 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 ELK3P41970 407 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SCNN1BP51168 640 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SUOXP51687 545 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 MAXP61244 160 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 PDE1BQ01064 536 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 IFFO1Q0D2I5 559 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SGCGQ13326 291 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 NAB1Q13506 487 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SLC1A5Q15758 541 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 UAP1Q16222 522 aaPredicted RBP12.04□□□□□ -0.48
CTNS-205ENST00000467663 KYNUQ16719 465 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 KLHL38Q2WGJ6 581 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SPANXN3Q5MJ09 141 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 KYAT3Q6YP21 454 aaKnown RBP12.04□□□□□ -0.48
CTNS-205ENST00000467663 Q6ZSR6 202 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 C3orf62Q6ZUJ4 267 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SLC25A45Q8N413 288 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 DENND6BQ8NEG7 585 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 OR52K1Q8NGK4 314 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SPATA22Q8NHS9 363 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 GSDMBQ8TAX9 411 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 ZCCHC14Q8WYQ9 949 aaKnown RBP12.04□□□□□ -0.48
CTNS-205ENST00000467663 C9orf72Q96LT7 481 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 ZNF641Q96N77 438 aaPredicted RBP12.04□□□□□ -0.48
CTNS-205ENST00000467663 STMN4Q9H169 189 aaPredicted RBP12.04□□□□□ -0.48
CTNS-205ENST00000467663 ATP13A3Q9H7F0 1226 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 LRRC4CQ9HCJ2 640 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 SOX13Q9UN79 622 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 PLAAQ9Y263 795 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 DOCK9Q9BZ29 2069 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
CTNS-205ENST00000467663 IGF2RP11717 2491 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 TP53BP1Q12888 1972 aaPredicted RBP12.03□□□□□ -0.48
CTNS-205ENST00000467663 TSPAN11A1L157 253 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 HEATR9A2RTY3 570 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 POM121BA6NF01 834 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 NEMP1O14524 444 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 MUSKO15146 869 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 SDC3O75056 442 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 TIMP2P16035 220 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 PAMP19021 973 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 DGKAP23743 735 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 ATP5DP30049 168 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 RABIFP47224 123 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 ACADVLP49748 655 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 DNAJC3Q13217 504 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 MSS51Q4VC12 460 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 STEAP4Q687X5 459 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 TMEM135Q86UB9 458 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
CTNS-205ENST00000467663 CDKL2Q92772 493 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 CYTH2Q99418 400 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 FICDQ9BVA6 458 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 KIFC1Q9BW19 673 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 TDRD1Q9BXT4 1180 aaKnown RBP12.03□□□□□ -0.48
CTNS-205ENST00000467663 EPB41L4BQ9H329 900 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 TRABDQ9H4I3 376 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 ACSS3Q9H6R3 686 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 VPS37BQ9H9H4 285 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 NOD2Q9HC29 1040 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 SLC24A2Q9UI40 661 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 MAD1L1Q9Y6D9 718 aa12.03□□□□□ -0.48
CTNS-205ENST00000467663 SPTY2D1-AS1A0A0U1RR47 76 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 SRRM3A6NNA2 597 aaPredicted RBP12.02□□□□□ -0.49
CTNS-205ENST00000467663 TRIM38O00635 465 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 FPGTO14772 594 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 HTRA2O43464 458 aaPredicted RBP12.02□□□□□ -0.49
CTNS-205ENST00000467663 RFPL3O75679 317 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 PIAS2O75928 621 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 ACSL3O95573 720 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 AGTP01019 485 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 GIMD1P0DJR0 217 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 CKMT2P17540 419 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 MGAT1P26572 445 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 SERPINA4P29622 427 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 SESN2P58004 480 aaPredicted RBP12.02□□□□□ -0.49
CTNS-205ENST00000467663 PFN3P60673 137 aa12.02□□□□□ -0.49
CTNS-205ENST00000467663 POLR2LP62875 67 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms