RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CALCRLQ16602 461 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SOWAHAQ2M3V2 549 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 KIF19Q2TAC6 998 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 TCP11X2Q5H9J9 407 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 ZNF766Q5HY98 468 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SLC9C2Q5TAH2 1124 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SNX30Q5VWJ9 437 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 GALNT17Q6IS24 598 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 KLHL10Q6JEL2 608 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 RRM2BQ7LG56 351 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 DIS3L2Q8IYB7 885 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 THNSL1Q8IYQ7 743 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 ADSSL1Q8N142 457 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SRBD1Q8N5C6 995 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 NAT8LQ8N9F0 302 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 KCTD6Q8NC69 237 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 C11orf65Q8NCR3 313 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 CREB3L4Q8TEY5 395 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SNAPC3Q92966 411 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 KIF1BPQ96EK5 621 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 BICD1Q96G01 975 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 IGSF21Q96ID5 467 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 OR1F2PQ96R84 312 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 BBS4Q96RK4 519 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 C20orf141Q9NUB4 165 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 INTS10Q9NVR2 710 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 HCN3Q9P1Z3 774 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 CTNNA3Q9UI47 895 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SH3BGRL2Q9UJC5 107 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 DUSP12Q9UNI6 340 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 KIF3AQ9Y496 699 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 LYVE1Q9Y5Y7 322 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 NFS1Q9Y697 457 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 hDV102S1A0JD36 115 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 IFITM10A6NMD0 228 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 TEX22C9J3V5 150 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 DDX39AO00148 427 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 TAF4O00268 1085 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 PES1O00541 588 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 BCAT2O15382 392 aaPredicted RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 SLC7A4O43246 635 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 HSPA12AO43301 675 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 KLK8O60259 260 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 TACC1O75410 805 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 ERAL1O75616 437 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE7O76087 117 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 AFPP02771 609 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 GALTP07902 379 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 RPS2P15880 293 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 CD58P19256 250 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 ITGAXP20702 1163 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GPTP24298 496 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 MAPK3P27361 379 aaPredicted RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 SSTR2P30874 369 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GGT5P36269 586 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 HADHAP40939 763 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 CD86P42081 329 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 RARSP54136 660 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 NLRP5P59047 1200 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GALNT2Q10471 571 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 AIMP1Q12904 312 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE1Q13065 139 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAGE4Q13068 117 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 ITGADQ13349 1161 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 PPP2R5BQ15173 497 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 SF3B4Q15427 424 aaKnown RBP eCLIP3.79□□□□□ -1.8
VPS50-209ENST00000467326 BAK1Q16611 211 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 C2orf76Q3KRA6 126 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 PPP6R3Q5H9R7 873 aaPredicted RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 RAB12Q6IQ22 244 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 IYDQ6PHW0 289 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 RHBDF2Q6PJF5 856 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 ATF7IPQ6VMQ6 1270 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 ZC3HC1Q86WB0 502 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 ZNF619Q8N2I2 560 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 PGBD5Q8N414 524 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 C10orf53Q8N6V4 93 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 ZNF114Q8NC26 417 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 MOSPD2Q8NHP6 518 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 USP6NLQ92738 828 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 FBXL8Q96CD0 374 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 FAM120BQ96EK7 910 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 TSGA13Q96PP4 275 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 DUX5Q96PT3 197 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 FNBP1Q96RU3 617 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 CITED2Q99967 270 aaPredicted RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 MAK16Q9BXY0 300 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 GAREM1Q9H706 876 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 DDX31Q9H8H2 851 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 SLC35C2Q9NQQ7 365 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 RABL2AQ9UBK7 228 aaPredicted RBP3.79□□□□□ -1.8
VPS50-209ENST00000467326 MALT1Q9UDY8 824 aa3.79□□□□□ -1.8
VPS50-209ENST00000467326 HOOK1Q9UJC3 728 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms