RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 DHFR2Q86XF0 187 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 SNX29P2Q8IUI4 249 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 URGCPQ8TCY9 931 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 NTAN1Q96AB6 310 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 ZUFSPQ96AP4 578 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 VPS33AQ96AX1 596 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 FTHL17Q9BXU8 183 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 RAP2CQ9Y3L5 183 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 RAD54BQ9Y620 910 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 RFPL2O75678 378 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 CLIC3O95833 236 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 LIMK2P53671 638 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 STX5Q13190 355 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 CTBP1Q13363 440 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 SDHAF4Q5VUM1 108 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 CHST15Q7LFX5 561 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 DENND6AQ8IWF6 608 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 OFCC1Q8IZS5 231 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 IPMKQ8NFU5 416 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 OR10T2Q8NGX3 314 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 ZFP90Q8TF47 636 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 ATL1Q8WXF7 558 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 SMARCD1Q96GM5 515 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 TEKT5Q96M29 485 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 SLC9A7Q96T83 725 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 ZBED2Q9BTP6 218 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 LHPPQ9H008 270 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 G3V2L1 256 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 TRIM13O60858 407 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 BCAS1O75363 584 aaPredicted RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 KRT8P05787 483 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CTGFP29279 349 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 RPL14P50914 215 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CSE1LP55060 971 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 ASCC1Q8N9N2 400 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 OR2T34Q8NGX1 318 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 OR2T3Q8NH03 318 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CDK5RAP1Q96SZ6 601 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 MPP6Q9NZW5 540 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 VTI1BQ9UEU0 232 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SLCO1B7G3V0H7 640 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 GSNP06396 782 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 HSPA1AP0DMV8 641 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 HSPA1BP0DMV9 641 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CXCR3P49682 368 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SCAPQ12770 1279 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 ILF2Q12905 390 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 ATP6AP1Q15904 470 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 NOMO2Q5JPE7 1267 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 TMTC4Q5T4D3 741 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 FAM219BQ5XKK7 198 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 LRRC8EQ6NSJ5 796 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 PIWIL3Q7Z3Z3 882 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SLCO6A1Q86UG4 719 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 LACC1Q8IV20 430 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SLC43A3Q8NBI5 491 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CANT1Q8WVQ1 401 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 TP53INP1Q96A56 240 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 VPS39Q96JC1 886 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 RRAGCQ9HB90 399 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SPAG4Q9NPE6 437 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 WARS2Q9UGM6 360 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 SLC2A6Q9UGQ3 507 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 CDH9Q9ULB4 789 aa17.98■□□□□ 0.47
SNAPC3-205ENST00000467062 MAN1A2O60476 641 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 RASAL1O95294 804 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 ITIH1P19827 911 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 THPOP40225 353 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 YAP1P46937 504 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 SLC12A1Q13621 1099 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 SAMD4BQ5PRF9 694 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 TBCELQ5QJ74 424 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 EPHX4Q8IUS5 362 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 LSMEM2Q8N112 164 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 ESX1Q8N693 406 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 HDAC11Q96DB2 347 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 KATNAL1Q9BW62 490 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 FBXO8Q9NRD0 319 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 CCM2LQ9NUG4 571 aaPredicted RBP17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 RALGAPA2Q2PPJ7 1873 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 SHROOM3Q8TF72 1996 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 ISPDA4D126 451 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 ABCB7O75027 752 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 PMPCBO75439 489 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 SERPINB10P48595 397 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 PLA2G16P53816 162 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 P2RX3P56373 397 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 CLCQ05315 142 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 SELPLGQ14242 412 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 MFSD4AQ8N468 514 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 GABPB2Q8TAK5 448 aaPredicted RBP17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 OMDQ99983 421 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 CLSTN3Q9BQT9 956 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 TASP1Q9H6P5 420 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 NMRAL1Q9HBL8 299 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 PADI3Q9ULW8 664 aa17.97■□□□□ 0.47
SNAPC3-205ENST00000467062 PRORSD1PA6NEY8 169 aa17.96■□□□□ 0.47
SNAPC3-205ENST00000467062 ZSCAN5BA6NJL1 495 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms