RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 FDXRP22570 491 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 LHX1P48742 406 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 AFF1P51825 1210 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 GNA12Q03113 381 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 KCNC4Q03721 635 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 ZIK1Q3SY52 487 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SPATS1Q496A3 300 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 XAF1Q6GPH4 301 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 TIGD7Q6NT04 549 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 DPP9Q86TI2 863 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 MYLPFQ96A32 169 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 BIRC7Q96CA5 298 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 IMP4Q96G21 291 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 CYP2S1Q96SQ9 504 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SEPHS2Q99611 448 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 OSER1Q9NX31 292 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 ANKRD12Q6UB98 2062 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 MBLAC1A4D2B0 266 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 ADAM23O75077 832 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 PAPSS2O95340 614 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 MBL2P11226 248 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 IDO1P14902 403 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 JUNBP17275 347 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 MAP4P27816 1152 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 CD86P42081 329 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 PGFP49763 221 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 TMBIM6P55061 237 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 FSCN1Q16658 493 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 C14orf80Q86SX3 495 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 PNPT1Q8TCS8 783 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 SGCDQ92629 289 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC10A4Q96EP9 437 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 ASB2Q96Q27 587 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 CHID1Q9BWS9 393 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 MUC13Q9H3R2 512 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 NOL6Q9H6R4 1146 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 NANOGQ9H9S0 305 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 NTN4Q9HB63 628 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 GNPTGQ9UJJ9 305 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 H0YAE9 185 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 BAIAP3O94812 1187 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 MMP2P08253 660 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 UMPSP11172 480 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 FUT4P22083 530 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 RCAN2Q14206 197 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 NR1D2Q14995 579 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 POLD3Q15054 466 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 DUSP28Q4G0W2 176 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 FBXO48Q5FWF7 155 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 OTUD3Q5T2D3 398 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 GALNT18Q6P9A2 607 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 ITIH5Q86UX2 942 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 BPIFB6Q8NFQ5 453 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 SCAMP5Q8TAC9 235 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 BPIFB1Q8TDL5 484 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 TRUB1Q8WWH5 349 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 ATOH8Q96SQ7 321 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 RTP3Q9BQQ7 232 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 PIF1Q9H611 641 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 PALMDQ9NP74 551 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 NT5MQ9NPB1 228 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 INTS7Q9NVH2 962 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 RIC8BQ9NVN3 520 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 PCDHGA11Q9Y5H2 935 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC30A1Q9Y6M5 507 aa12.93□□□□□ -0.34
PDZRN3-205ENST00000466780 UPK1AO00322 258 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 NOL3O60936 208 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 KCNH1O95259 989 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 PRR35P0CG20 571 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 CLCNKBP51801 687 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 OR4D2P58180 307 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 DSC2Q02487 901 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 GSTM4Q03013 218 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 PTPRCAPQ14761 206 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 GRAMD4Q6IC98 578 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TMEM214Q6NUQ4 689 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TMEM86AQ8N2M4 240 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 RTL3Q8N8U3 475 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 GABPB2Q8TAK5 448 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 KLHL5Q96PQ7 755 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 LHPPQ9H008 270 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TIMM22Q9Y584 194 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 SYNCRIPO60506 623 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 EEDO75530 441 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 C1RP00736 705 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 ALBP02768 609 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 TCF3P15923 654 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 ZNF37AP17032 561 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 EEFSECP57772 596 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 UFM1P61960 85 aa12.92□□□□□ -0.34
PDZRN3-205ENST00000466780 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms